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Neuron morphology processing scripts

Project description

Neuron morphology processing scripts:

  • mcheck test morphology reconstruction for structural consistency
  • mfind find singularities in morphological reconstruction
  • mmeter perform morphometric analysis
  • mmod modify morphology
  • mrep repair or correct neuron morphology
  • msholl Sholl analysis of morphological reconstruction
  • mview view neuron morphology

See command line help for details.

Installation

Install the latest release:

pip install morphon

Install a development version:

pip install git+git://github.com/a1eko/morphon

See pip documentation for installation alternatives.

Project details


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