mrilite
mrilite is a lightweight Python toolkit for handling 3D MRI volumes.
It provides simple and minimal utilities for:
- loading and saving NIfTI files
- basic preprocessing (z-score normalization)
- visualizing MRI slices
- overlaying segmentation masks
Designed to be small, dependency-light, and easy to reuse across many MRI projects.
Installation
Using pip:
pip install mrilite
Or install locally:
pip install -e .
Quick Start
from mrilite import load_nifti, zscore, show_slice_with_overlay
vol = load_nifti("t1.nii.gz")
seg = load_nifti("seg.nii.gz")
vol = zscore(vol)
show_slice_with_overlay(vol, seg, axis=2, index=80)
Features
- Minimal and clean API
- Works with any 3D/4D NIfTI MRI
- Transparent segmentation overlay
- Only essential dependencies (
numpy,nibabel,matplotlib)
License
MIT License.
1 maintainer
Metadata
1 maintainer
Release files for mrilite 0.1.2
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| mrilite-0.1.2.tar.gz | 6.3 kB | Without provenance | Details for mrilite-0.1.2.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| mrilite-0.1.2-py3-none-any.whl | Python 3 | none | any | Details for mrilite-0.1.2-py3-none-any.whl |
Total release size: 12.5 kB
Release files / mrilite-0.1.2.tar.gz
| Download URL | mrilite-0.1.2.tar.gz |
|---|---|
| Size | 6.3 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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Release files / mrilite-0.1.2-py3-none-any.whl
| Download URL | mrilite-0.1.2-py3-none-any.whl |
|---|---|
| Size | 6.2 kB |
| Tags | Python 3 |
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twine/6.2.0 CPython/3.12.4
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Security for mrilite 0.1.2
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