Project description

msea: Microbe-Set Enrichment Analysis (MSEA) for functional interpretation of sets of microbial organisms

What is it?

msea a Python package implementing the Microbe-Set Enrichment Analysis pipeline, helping microbiologists make sense of collections microbes via external annotations.

Installation

# from PyPI
pip install msea

Dependencies

Tutorial

Please refer to examples.

Development

For local development:

python setup.py develop

To run tests:

python setup.py test

To build documentation:

./make_docs.sh

License

BSD 3

Project details

These details have not been verified by PyPI

Project links

Homepage

Release history Release notifications | RSS feed

0.0.2

Jan 18, 2021

This version

0.0.1

Mar 28, 2020

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