Multiscale Spectral Similarity Index
An MS-SSIM inspired metric for assessing imputation accuracy in spatial transcriptomics data. MSSI works by iterativly pooling the graph representing the spatial data and relies on the graph-coarsening package (https://github.com/loukasa/graph-coarsening) which can be installed through the commands:
git clone git@github.com:loukasa/graph-coarsening.git
cd graph-coarsening
pip install .
And then mssi can be installed via pip:
pip install mssi
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Release files for mssi 0.1.9
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| mssi-0.1.9.tar.gz | 3.3 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| mssi-0.1.9-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 9.0 kB
Release files / mssi-0.1.9.tar.gz
| Download URL | mssi-0.1.9.tar.gz |
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| Size | 3.3 kB |
| Tags | Source |
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Release files / mssi-0.1.9-py3-none-any.whl
| Download URL | mssi-0.1.9-py3-none-any.whl |
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| Size | 5.7 kB |
| Tags | Python 3 |
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