mtdynamics 0.1.0

MT dynamics simulation

Microtubule dynamics simulation

Simulation of microtubule growth dynamics in the presence and absence of physical obstacles.

Work done by:

• Simulation code: Florian Huber and Maurits Kok
• Experiments run by: Maurits Kok and Svenja-Marei Kalisch
• Marileen Dogterom

Simulation code

The full simulation code used to produce the results as published in [coming soon] is provided.\ in this repository.
The code consits of the main simulation code (simulation_main.py and simulation_functions.py). Simulation parameters are specified in simulation_parameters.py. Functions for plotting the results are provided in plotting_functions.py.

Runing the simulation

Jupyter notebook(s) are provided to illustrate how to run the simlation. They can be found in the folder '\notebooks'.