napari-generic-SIMulator 0.0.10

A simple plugin to use with napari to simulate raw image stacks in Structured illumination microscopy (SIM) with napari.

napari-generic-SIMulator

A napari plugin to simulate raw-image stacks of Structured illumination microscopy (SIM) with light sheet. The simulation can be GPU-accelerated if cupy is installed.
Currently applies to:

• conventional 2-beam SIM data with 3 angles and 3 phases
• 3-beam hexagonal SIM data with 7 phases
• 3-beam hexagonal SIM data with 7 phases at right-angles

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This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install napari-generic-SIMulator via pip:

pip install napari-generic-SIMulator

To install latest development version :

pip install git+https://github.com/Meizhu-Liang/napari-generic-SIMulator.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "napari-generic-SIMulator" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.