NewberryAI Python Package
Project description
NewberryAI
A Python package for AI tools using LLM.
Overview
- Compliance Checker: Analyze videos for regulatory compliance
- HealthScribe: Medical transcription using AWS HealthScribe
- Differential Diagnosis (DDx) Assistant: Get assistance with clinical diagnosis
- Excel Formula Generator AI Assistant: Get assistance with Excel Formulas
- Medical Bill Extractor: Extract and analyze data from medical bills
- Coding Assistant: Analyze code and help you with coding as debugger
- Speech to speech assistant: Real-time voice interactive assistant
- PII Redactor AI assistant: Analyze text and remove PII (personally identifiable information) from the text
- PII extractor AI assistant: Analyze text and extract PII (personally identifiable information) from the text
- EDA AI assistant: Perform detailed data exploration with real statistics, hypothesis testing, and actionable insights—no code, just direct analysis.
- PDF Summarizer: Extract and summarize content from PDF documents
Installation
pip install newberryai
Usage
You can use the command-line interface:
newberryai <command> [options]
Available commands:
compliance- Run compliance check on medical videoshealthscribe- Transcribe medical conversationsddx- Get differential diagnosis assistanceExcelO- Get excel formula AI assistancebill_extract- Extract and analyze medical bill datacoder- Analyze code and help you with coding as debuggerspeech_to_speech- Launch the real-time Speech-to-Speech assistant.PII_Red- Analyze text and remove PII from the text using AI.PII_extract- Analyze text and extract PII from the text using AI.
CLI Tool
Compliance Checker
newberryai compliance --video_file /path/to/video.mp4 --question "Is the video compliant with safety regulations such as mask?"
HealthScribe
newberryai healthscribe --file_path conversation.wav \
--job_name myJob \
--data_access_role_arn arn:aws:iam::aws_accountid:role/your-role \
--input_s3_bucket my-input-bucket \
--output_s3_bucket my-output-bucket \
--s3_key s3-key
Differential Diagnosis Assistant
# With a specific clinical indication
newberryai ddx --clinical_indication "Patient presents with fever, cough, and fatigue for 5 days"
# Interactive CLI mode
newberryai ddx --interactive
# Launch Gradio web interface
newberryai ddx --gradio
Excel Formula Assistant
# With a specific Excel Query
newberryai ExcelO --Excel_query "Calculate average sales for products that meet specific criteria E.g: give me excel formula to calculate average of my sale for year 2010,2011 sales is in col A, Year in Col B and Months in Col C"
# Interactive CLI mode
newberryai ExcelO --interactive
# Launch Gradio web interface
newberryai ExcelO --gradio
Medical Bill Extractor
# Analyze a specific document
newberryai bill_extract --file_path /path/to/medical_bill.jpeg
# Interactive CLI mode
newberryai bill_extract --interactive
# Launch Gradio web interface
newberryai bill_extract --gradio
Python Coding Assistant
# With a specific python coding Query
newberryai coder --code_query " your Query related to your python code"
# Interactive CLI mode
newberryai coder --interactive
# Launch Gradio web interface
newberryai coder --gradio
PII Redactor AI Assistant
# With a specific Text
newberryai PII_Red --text " your text containing PII."
# Interactive CLI mode
newberryai PII_Red --interactive
# Launch Gradio web interface
newberryai PII_Red --gradio
PII Extractor AI Assistant
# With a specific Text
newberryai PII_extract --text " your text containing PII."
# Interactive CLI mode
newberryai PII_extract --interactive
# Launch Gradio web interface
newberryai PII_extract --gradio
Speech to Speech Assitant
# Launch the real-time speech-to-speech application
newberryai speech_to_speech
Python Module
You can also use NewberryAI as a Python module in your applications.
HealthScribe
from newberryai import HealthScribe
import os
import newberryai
# Set the environment variables for the AWS SDK
os.environ['AWS_ACCESS_KEY_ID'] = 'your_aws_access_key_id'
os.environ['AWS_SECRET_ACCESS_KEY'] = 'your_aws_secret_access_key'
os.environ['AWS_REGION'] = 'your_aws_region'
# Initialize the client
scribe = HealthScribe(
input_s3_bucket="input-bucket",
data_access_role_arn="arn:aws:iam::12345678912:role/your_role"
)
# Process an audio file
result = scribe.process(
file_path="/path/to/audio_file.mp3",
job_name="test_job_1",
output_s3_bucket="output-bucket"
)
# Use the summary
print(result.summary)
Compliance Checker
from newberryai import ComplianceChecker
checker = ComplianceChecker()
video_file = "/path/to/video.mp4"
compliance_question = "Is the video compliant with safety regulations such as mask?"
# Call the compliance-checker function
result, status_code = checker.check_compliance(
video_file=video_file,
question=compliance_question
)
# Check for errors
if status_code:
print(f"Error: {result.get('error', 'Unknown error')}")
else:
# Print the compliance check result
print(f"Compliant: {'Yes' if result['compliant'] else 'No'}")
print(f"Analysis: {result['analysis']}")
Differential Diagnosis Assistant
from newberryai import DDxChat
# Initialize the DDx Assistant
ddx_chat = DDxChat()
# Ask a specific clinical question
response = ddx_chat.ask("Patient presents with fever, cough, and fatigue for 5 days")
print(response)
# Alternatively, launch interactive CLI
# ddx_chat.run_cli()
# Or launch the Gradio web interface
# ddx_chat.start_gradio()
Excel Formual Genenrator AI Assistant
from newberryai import ExcelExp
# Initialize the DDx Assistant
excel_expert = ExcelExp()
# Ask a specific clinical question
response = excel_expert.ask("Calculate average sales for products that meet specific criteria E.g: give me excel formula to calculate average of my sale for year 2010,2011 sales is in col A, Year in Col B and Months in Col C")
print(response)
# Alternatively, launch interactive CLI
# excel_expert.run_cli()
# Or launch the Gradio web interface
# excel_expert.start_gradio()
Medical Bill Extractor
from newberryai import Bill_extractor
# Initialize the Bill Extractor
extractor = Bill_extractor()
# Analyze a document
analysis = extractor.analyze_document("/path/to/medical_bill.jpeg")
print(analysis)
# Alternatively, launch interactive CLI
# extractor.run_cli()
# Or launch the Gradio web interface
# extractor.start_gradio()
Coding and Debugging AI Assistant
from newberryai import CodeReviewAssistant
# Initialize the DDx Assistant
code_debugger = CodeReviewAssistant()
# Ask a specific clinical question
response = code_debugger.ask("""Explain and correct below code
def calculate_average(nums):
sum = 0
for num in nums:
sum += num
average = sum / len(nums)
return average
numbers = [10, 20, 30, 40, 50]
result = calculate_average(numbers)
print(“The average is:”, results)""")
print(response)
# Alternatively, launch interactive CLI
# code_debugger.run_cli()
# Or launch the Gradio web interface
# code_debugger.start_gradio()
Speech-to-Speech Assistant
from newberryai import RealtimeApp
# Initialize and run the speech-to-speech assistant
app = RealtimeApp()
app.run()
PII Redactor AI Assistant
from newberryai import PII_Redaction
# Initialize the PII Redactor Assistant
pii_red = PII_Redaction()
# Provide a text to detect PII
response = pii_red.ask("Patient name is John Doe with fever. he is from Austin,Texas.His email id is john.doe14@email.com")
print(response)
# Alternatively, launch interactive CLI
# pii_red.run_cli()
# Or launch the Gradio web interface
# pii_red.start_gradio()
PII extractor AI Assistant
from newberryai import PII_extraction
# Initialize the PII Extraction Assistant
pii_extract = PII_extraction()
# Provide a text to detect PII
response = pii_extract.ask("Patient name is John Doe with fever. he is from Austin,Texas.His email id is john.doe14@email.com")
print(response)
# Alternatively, launch interactive CLI
# pii_extract.run_cli()
# Or launch the Gradio web interface
# pii_extract.start_gradio()
PDF Document Summarizer
from newberryai import DocSummarizer
# Initialize the PDF Summarizer
summarizer = DocSummarizer()
# Summarize a specific document
response = summarizer.ask("/path/to/your/document.pdf")
print(response)
# Alternatively, launch interactive CLI
# summarizer.run_cli()
# Or launch the Gradio web interface
# summarizer.start_gradio()
EDA - Exploratory Data Analysis
from newberryai import EDA
eda = EDA()
# Load your dataset (set current_data manually if needed)
import pandas as pd
eda.current_data = pd.read_csv("/path/to/your/data.csv")
# Ask your analysis question (e.g. descriptive statistics, hypothesis testing)
response = eda.ask("What is the average value of column 'Sales'?")
print(response)
# Generate visualizations (distribution, correlation, categorical, time series)
eda.visualize_data("dist") # distribution plots
eda.visualize_data("corr") # correlation heatmap
eda.visualize_data("cat") # categorical distributions
eda.visualize_data("time") # time series plots if datetime present
# Alternatively, start CLI for interactive session
# eda.run_cli()
# Or launch Gradio interface
# eda.start_gradio()
CLI Usage for PDF Summarizer
# With a specific document
newberryai pdf_summarizer --code /path/to/your/document.pdf
# Interactive CLI mode
newberryai pdf_summarizer --interactive
# Launch Gradio web interface
newberryai pdf_summarizer --gradio
CLI Usage for EDA
#Analyze a CSV file interactively
newberryai eda --file_path /path/to/your/data.csv --interactive
#Launch Gradio web interface
newberryai eda --file_path /path/to/your/data.csv --gradio
#Generate visualizations (after loading a file)
newberryai eda --file_path /path/to/your/data.csv --visualize
#### Troubleshooting: SSL Certificate Issues
If you encounter SSL certificate errors while running NewberryAI, you can fix them by running:
```sh
pip install --upgrade certifi
export SSL_CERT_FILE=$(python -c "import certifi; print(certifi.where())")
This ensures that your system is using the latest SSL certificates.
Setting Up OpenAI API Key for Speech-to-Speech
To use OpenAI's Speech-to-Speech features, you need to set your API key as an environment variable.
Step-by-Step:
-
Get your API key from https://platform.openai.com/account/api-keys
-
Set the environment variable in your terminal or shell configuration file.
For bash or zsh (macOS/Linux):
export OPENAI_API_KEY="your-api-key-here"
You can add this line to your ~/.bashrc, ~/.bash_profile, or ~/.zshrc file to make it permanent.
For Windows (Command Prompt):
set OPENAI_API_KEY=your-api-key-here
For Windows (PowerShell):
$env:OPENAI_API_KEY="your-api-key-here"
- Verify it's set by running:
echo $OPENAI_API_KEY
Requirements
- Python 3.8+
- OpenAI account with Api keys
- AWS account with appropriate permissions
- Required AWS services:
- Amazon S3
- AWS HealthScribe
- AWS IAM
AWS Configuration
To use the AWS-powered features, you need to set up the following:
- An AWS account with appropriate permissions
- AWS IAM role with access to required services
- S3 buckets for input and output data
- AWS credentials configured in your environment
License
This project is licensed under the MIT License.
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