Nexotype MCP Server

AI-powered biomedical knowledge graph for drug discovery, genomics, and market intelligence.

Connect your AI tools to the Nexotype platform and query the biomedical knowledge graph through conversation.

Installation

pip install nexotype-mcp

Or with uv:

# Install uv (if not already installed)
brew install uv

# Add uv tools to PATH (one-time setup)
echo 'export PATH="$HOME/.local/bin:$PATH"' >> ~/.zshrc
source ~/.zshrc

# Install nexotype-mcp
uv tool install nexotype-mcp

Already installed? Update:

pip install --upgrade nexotype-mcp
# or
uv tool upgrade nexotype-mcp

Authentication

nexotype-cli login

Enter your email and password. Credentials are stored securely at ~/.nexotype/credentials.json (chmod 600).

Configure Your AI Client

Claude Desktop

Edit ~/Library/Application Support/Claude/claude_desktop_config.json (macOS) or %APPDATA%\Claude\claude_desktop_config.json (Windows):

{
  "mcpServers": {
    "nexotype": {
      "command": "nexotype-mcp"
    }
  }
}

Claude Code

claude mcp add nexotype -- nexotype-mcp

VS Code / Cursor

Add to your MCP settings:

{
  "nexotype": {
    "command": "nexotype-mcp"
  }
}

Restart the application after saving.

Tools (28)

Graph Intelligence (6 tools)

AI Query (1 tool)

Search & Browse (2 tools)

Context (3 tools)

Personalized Health (10 tools)

Commercial Intelligence (6 tools)

Example Queries

"What drugs target EGFR and are in Phase III?"
"Show me Novo Nordisk's full portfolio"
"What variants are associated with Alzheimer's risk?"
"Compare GLP-1 receptor agonists across companies"
"Who else is targeting mTOR?"
"List all therapeutic peptides in the database"
"What are my detected genomic variants?"

CLI Commands

Environment Variables