nfer-image

utilities for working with images

Project description

# Utility module for working with images

## Installation from source: `sh cd nfer_image pip install . `

## HPA Utility Tools (hpa_utils) - image loading & download utility from s3 bucket - image download from specific s3 bucket - image save (pyplot based) - image tiling - stain estimation - tissue mask generation

## Embedding Tools - CNN bottleneck/fully-connected layer extraction

## Clustering Tools - TSNE generation from image embeddings

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This version

0.2

Oct 23, 2019

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