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Automatic inference of neighboring cells based on their Delaunay triangulation.

Project description

Nfinder

Automatic inference of neighboring cells based on their Delaunay triangulation.

Dependencies

nfinder was tested with:

  • python = 3.8.5
  • napari = 0.4.12
  • numpy = 1.21.2
  • pandas = 1.3.4
  • scikit-image = 0.18.3
  • scipy = 1.7.1
  • importlib-resources 5.4.0

Installation

It can be installed with pip from PyPI:

pip install nfinder

Usage

For usage examples, please check out the notebook in our GitHub repository.

Project details


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nfinder-0.3.tar.gz (632.6 kB view hashes)

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