nheatmap
Inspired by pheatmap in R, this plotting tool aims to enable multi-level heatmap with the option to perform hierarchical clustering. The goal is to develop a python plotting package that is both intuitive in usage and extensive in plotting configuration.
Requirements
python >= 3.5matplotlib >= 3.0.3scipy >= 1.3.1numpy >= 1.17.2pandas >= 0.25.1
Installation
- Option 1 via pip:
pip install nheatmap
- Option 2 via github:
git clone https://github.com/xuesoso/nheatmap
Include the cloned directory as part of the python path
Usage
- Check here for a tutorial on usage.
To-do
- Documentation of the code
- Cutting of heatmap
- Bottom panel plots
- Enable usage of AnnData structure
- Highlight individual rows / columns
Other plotting tools
1 maintainer
Metadata
1 maintainer
Release files for nheatmap 0.1.4
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
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| nheatmap-0.1.4.tar.gz | 10.8 kB | Without provenance | Details for nheatmap-0.1.4.tar.gz |
Built distributions (wheels)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| nheatmap-0.1.4-py3.8.egg | Legacy Egg format | - | - | Details for nheatmap-0.1.4-py3.8.egg |
| nheatmap-0.1.4-py3-none-any.whl | Python 3 | none | any | Details for nheatmap-0.1.4-py3-none-any.whl |
Total release size: 55.8 kB
Release files / nheatmap-0.1.4.tar.gz
| Download URL | nheatmap-0.1.4.tar.gz |
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| Size | 10.8 kB |
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Release files / nheatmap-0.1.4-py3.8.egg
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| Size | 22.4 kB |
| Tags | Egg |
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Release files / nheatmap-0.1.4-py3-none-any.whl
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| Size | 22.6 kB |
| Tags | Python 3 |
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