A biological inform neural network
Project description
Install package
pip install nnea
Clone the repository
git clone git@github.com:liuchuwei/nnea.git
Load Immunotherapy Dataset
mkdir datsaets
mkdir factory
mkdir factory/tumor_immunotherapy
cd factory/tumor_immunotherapy
wget --referer="https://figshare.com/" \
--user-agent="Mozilla/5.0" \
-c "https://figshare.com/ndownloader/files/56402492" -O exp.txt
wget --referer="https://figshare.com/" \
--user-agent="Mozilla/5.0" \
-c "https://figshare.com/ndownloader/files/56402489" -O phe.txt
python run.py dataload --config config/generate_dataset.toml
Generate Dataset
dataload --config config/generate_dataset.toml
Train model
train --config config/tumor_imm.toml
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