NxRepair is an automated error detection tool for use with de novo assemblies from Nextera mate pair data.
We have a tutorial and API on ReadTheDocs
To get started, here’s how to use NxRepair (more details, caveats and options in the tutorial):
nxrepair aligned_matepairs.bam assemblyfasta.fasta error_locations.csv new_fasta.fasta1 maintainer
Metadata
1 maintainer
Release files for nxrepair 0.13
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| nxrepair-0.13.tar.gz | 9.4 kB | Details |
Release files / nxrepair-0.13.tar.gz
| Download URL | nxrepair-0.13.tar.gz |
|---|---|
| Size | 9.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
80efacb4c9e4213060e95e1a1bfec548af59c2ad79b7a91bcc023330040bb1b6
|
|
BLAKE2b-256 checksum How to use checksums |
c23af0b3e44a96c79843902ab7a2500a613e3b2530b7596343ba3f726cb105cb
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
