Automated error detection using Nextera Mate Pair data
Project description
NxRepair is an automated error detection tool for use with de novo assemblies from Nextera mate pair data.
We have a tutorial and API on ReadTheDocs
To get started, here’s how to use NxRepair (more details, caveats and options in the tutorial):
nxrepair aligned_matepairs.bam assemblyfasta.fasta error_locations.csv new_fasta.fasta
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
nxrepair-0.13.tar.gz
(9.4 kB
view hashes)