omexml-dls
Package to help simply and consistently create and parse OME metadata for B24 of Diamond Light Source Ltd. This is a modified copy of python_bioformats' omexml.py with a section from the Allen Institute for Cell Science's aicsimageio version of omexml.py (indicated within the file). This package extends capabilities, predominantly in terms of ROIs, while offering a light-weight distribution of the omexml file.
Recommended import:
from oxdls import OMEXML
Current changes (compared to python-bioformats)
- TiffData - this allows IFDs to be defined (created using
set_tiffdata_count(value)) (from aicsimageio) set_andget_ExposureTime()functions have been added- X, Y, Z units have been added for each plane
- Square ROIs (an roiref must be created for each ROI first, then ROIs are created using
set_roi_count(value), then for each ROI: ROI > Union > Rectangle, where ROI parameters can be set) - Small formatting changes to improve consistency
1 maintainer
Metadata
1 maintainer
Release files for omexml-dls 1.1.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| omexml-dls-1.1.0.tar.gz | 16.4 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| omexml_dls-1.1.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 33.1 kB
Release files / omexml-dls-1.1.0.tar.gz
| Download URL | omexml-dls-1.1.0.tar.gz |
|---|---|
| Size | 16.4 kB |
| Tags | Source |
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Release files / omexml_dls-1.1.0-py3-none-any.whl
| Download URL | omexml_dls-1.1.0-py3-none-any.whl |
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| Size | 16.6 kB |
| Tags | Python 3 |
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