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Run jobs from your repo anywhere: Slurm over SSH, any SSH box, Kaggle, Colab, or marketplace GPUs

Project description

omnirun

Run a command from your git repo on the best compute you have access to — a university Slurm cluster over SSH, any box you can ssh into, Kaggle, Colab, or an auto-provisioned marketplace GPU (RunPod / Vast.ai / Thunder Compute). One submit pins the exact commit, ships it to the worker, builds the Python env from your lockfiles (uv / micromamba), runs the command, and collects outputs — the scheduler automatically picks the cheapest/fastest option that fits.

$ omnirun submit --gpus 1 --gpu-type A100 --time 4h -- python train.py --epochs 50
submitted train-a3f9c1 -> uni: gpu partition (1x A100)
follow logs with: omnirun logs -f train-a3f9c1

$ omnirun logs -f train-a3f9c1
epoch 1/50 loss=2.31 ...

$ omnirun cancel train-a3f9c1          # graceful stop; add --force to hard-kill
cancelled train-a3f9c1

$ omnirun pull train-a3f9c1
pulled 3 path(s) to omnirun-outputs/train-a3f9c1

omnirun offers shows the full ranked table without submitting — useful before you commit:

$ omnirun offers --gpus 1 --gpu-type A100 --time 4h
  #  offer                                    $/hr    est. total  wait          notes
  1  uni: gpu partition (1x A100)             free    -           idle nodes available
  2  thunder: a100xl $1.09/hr                 1.09    $4.36       ~2-3 min      virtualized GPU-over-TCP…
  3  vast: A100_SXM4 x1 $1.21/hr (Iceland)    1.21    $4.84       ~2-3 min      offers churn…
  4  runpod: NVIDIA A100 80GB PCIe (SECURE)   1.64    $6.56       ~2-3 min
  (kaggle: unfit — A100 requires Colab-Pro-linked account)

How it works

A job is (pushed git revision, command, resources). On submit, omnirun checks your working tree is clean and HEAD is pushed (with a --push escape hatch that pushes for you), then every backend executes the same generated bootstrap.sh on the worker:

  1. keep the repo's object store under a per-project project_root (default $OMNIRUN_ROOT/projects/<slug>; you can point it at an existing checkout to reuse its .git and .venv) — a bare repo.git mirror, or that checkout's own .git. The client pushes the exact sha to a non-branch ref refs/omnirun/<sha12> over its own SSH connection; for Kaggle/Colab a public repo is cloned directly by the worker over its own connection (no credentials needed) and a private repo instead rides as a git bundle, so git credentials never leave your laptop and pushing into an existing checkout is safe;
  2. check out a worktree shared per git revision at .trees/<sha12> (guarded by a .locks/ flock) — jobs at the same sha reuse the checkout instead of each getting their own;
  3. build the env from what the repo declares: uv.lock / pyproject.tomluv sync, requirements.txtuv venv + uv pip install, environment.yml → micromamba (uv/micromamba are installed user-space as static binaries if missing) — into one .venv shared across all worktrees of the project (UV_PROJECT_ENVIRONMENT);
  4. run the command, tee logs, touch a heartbeat every 30 s, write result.json on exit;
  5. collect your outputs globs into the per-job dir (jobs/<job_id>/, which holds only logs, outputs, and result.json) for omnirun pull.

Placement is automatic. submit runs a synchronous scheduler tick that probes backends, picks the cheapest/fastest fitting option (free first, paid only if no free slot fits), and places the job — all in one command. No manual offer-picking. omnirun offers remains the way to inspect the option table before committing.

The direct omnirun submit path is daemonless and has no control plane. Client state lives in a SQLite database at ~/.local/share/omnirun/omnirun.db (see State storage); job status is derived by polling the worker's job dir (result.json presence, heartbeat freshness) merged with runtime-native signals (Slurm state, PID liveness, kernel status) — pull, not callbacks. Your laptop can be off while jobs run; omnirun ps re-syncs.

When you want to queue many jobs and have them spread automatically, there is an optional scheduler daemon you run yourself (omnirun serve) — see Queueing many jobs. It's an add-on, not a requirement: single submits never touch it.

State storage (optional)

omnirun stores all state in a SQLite database (~/.local/share/omnirun/omnirun.db). The [state] config section lets you relocate it, or point it at a PostgreSQL server for a shared always-on daemon (see docs/deploy.md):

[state]
# path = "/custom/omnirun.db"                 # explicit SQLite path
# url  = "sqlite:////abs/path/omnirun.db"     # explicit SQLite URL (wins over path)
# url  = "postgresql+psycopg://omnirun@localhost/omnirun"  # shared Postgres store

The schema is created and migrated automatically on first open — multiple CLI processes and the daemon can share one database safely. A DB written by a newer omnirun makes older binaries refuse to touch it (they name both schema versions and exit); upgrade the binary rather than downgrade the database.

omnirun state path             # print the active database URL

Queueing many jobs (optional)

omnirun serve runs an always-on scheduler daemon in the foreground (background it yourself — it's meant to live on a small VPS under mosh/tmux). It listens on a localhost TCP socket (default 127.0.0.1:8787) and owns a durable queue persisted in the SQL state store, so a restart resumes where it left off.

omnirun serve &                              # start the daemon (localhost only)
omnirun enqueue --count 20 -- python sweep.py --config $CONFIG
omnirun queue                                # show the queue
omnirun queue --wait                         # block until every entry is terminal
omnirun queue --cancel all                   # cancel everything queued/running

The scheduler spreads queued jobs across all configured backends, respecting a per-backend max_parallel cap: it reserves a slot before submitting (so ticks never double-book a backend), backfills as running jobs finish, and retries a failed placement (up to 3 attempts) on another backend before giving up. Minimizing provisioning cost by reusing warm workers is a planned next phase, not yet implemented — every placement is still a plain one-shot submit.

Deploying the daemon

To run the scheduler permanently on a VPS — under systemd, backed by a shared PostgreSQL store, serving jobs from any number of repos — see docs/deploy.md. It has a reference systemd unit, the Postgres setup, and how project scoping (ps/queue default to the current repo, -A for the whole fleet) works across projects.

Install

On PyPI:

uv tool install omnirun         # or: pip install omnirun

Or from this repo:

uv tool install ".[all]"        # or: pip install -e ".[all]"

Extras: kaggle (the kaggle API client), colab (the official google-colab-cli), all = both — e.g. uv tool install "omnirun[all]". The core (local / ssh / slurm / marketplaces) has no optional deps. Requires Python ≥ 3.12, plus git, and the OpenSSH client + rsync for the ssh-family backends.

Configuration

Global config: ~/.config/omnirun/config.toml (override with --config or $OMNIRUN_CONFIG). Every [backends.<name>] section needs a type; the section name is yours (you can have several of the same type). All backends accept enabled = false to keep the config without probing it. Every backend also accepts project_root (point it at an existing checkout to reuse its .git/.venv) and max_parallel (queue-daemon cap on concurrent jobs, default 1). project_root may be a single path (applied to every repo) or a table mapping repo slug -> path, with an optional default key as fallback, so one backend can serve several repos (each getting the right checkout).

[policy]
auto_wait_threshold = "15m"  # a free offer starting sooner than this is auto-picked
max_hourly_default = 5.0     # also used as the $ value of an hour of your waiting
probe_timeout_s = 10.0       # per-backend probe budget

# ---- optional queue daemon (only used by `omnirun serve`) ----
[daemon]
host = "127.0.0.1"           # localhost socket; bind 0.0.0.0 + auth to go remote
port = 8787
poll_interval_s = 10.0       # scheduler tick: refresh running + place pending

# ---- run on this machine (mostly for testing the pipeline) ----
[backends.local]
type = "local"
# root = "$HOME/.omnirun"    # OMNIRUN_ROOT: where jobs live
# project_root = "$HOME/proj"  # reuse an existing checkout's .git and .venv
# project_root = { my-repo = "$HOME/proj" }  # or per-repo (by slug), else default path
# max_parallel = 2           # queue daemon: run up to 2 jobs here at once

# ---- any machine you can ssh into ----
[backends.rig]
type = "ssh"
host = "uncle-gaming"        # ~/.ssh/config alias; ProxyJump/2FA/Kerberos honored
gpus = [{ type = "4090", count = 1 }]  # static declaration; probe verifies via nvidia-smi
# root = "$HOME/.omnirun"
# env_setup = ["export CUDA_HOME=/usr/local/cuda"]  # lines run before env creation
# port = 2222                # rarely needed — prefer putting these in ~/.ssh/config
# identity = "~/.ssh/id_ed25519"

# ---- Slurm cluster reached through its login node ----
[backends.uni]
type = "slurm"
host = "hpc-login"           # ssh alias for the login node
partition = "gpu"
account = "myproject"
# qos = "normal"
root = "$SCRATCH/omnirun"    # home quotas are small; keep envs/worktrees on scratch
env_setup = ["module load cuda/12.4"]
# normalized GPU name -> site's gres/constraint template:
#   "gres:a100:{n}"     -> #SBATCH --gres=gpu:a100:{n}
#   "constraint:a100"   -> #SBATCH --constraint=a100 + --gres=gpu:{n}
gpu_map = { "A100-80" = "gres:a100:{n}", "V100" = "gres:v100:{n}" }
extra_directives = ["--mail-type=FAIL"]  # raw #SBATCH lines
# time_default = "1:00:00"   # --time when the job doesn't set one

# ---- Kaggle kernels (free GPU quota) ----
[backends.kaggle]
type = "kaggle"              # creds: ~/.config/kaggle/kaggle.json or KAGGLE_USERNAME/KAGGLE_KEY
                            # weekly GPU quota is read live from Kaggle's quota API

# ---- Colab via the official google-colab-cli ----
[backends.colab]
type = "colab"               # one-time `colab` OAuth; keep-alive daemon runs locally
# default_gpu = "T4"         # session GPU when the job doesn't pin a type

# ---- GPU marketplaces (all take max_hourly + the shared extras below) ----
[backends.runpod]
type = "runpod"              # $RUNPOD_API_KEY (rename via api_key_env = "MY_VAR")
max_hourly = 3.5             # drop offers above this $/hr
# image = "runpod/pytorch:2.4.0-py3.11-cuda12.4.1-devel-ubuntu22.04"

[backends.vast]
type = "vast"                # $VAST_API_KEY
max_hourly = 2.0
# image = "vastai/base-image:cuda-12.4.1-auto"

[backends.thunder]
type = "thunder"             # $TNR_API_TOKEN
# cpu_cores = 8
# template = "ubuntu-22.04"
# mode = "prototyping"       # cheap virtualized mode; "production" = dedicated

# shared marketplace extras (any of runpod/vast/thunder):
#   auto_terminate = true       # destroy the instance on pull/cancel/gc
#   idle_failsafe = true        # on-instance watchdog: shutdown after the job + grace
#   failsafe_grace_s = 86400    # grace before the failsafe shutdown (time to pull)
#   provision_timeout_s = 600
#   ssh_wait_timeout_s = 120
#   ssh_public_key = "~/.ssh/id_ed25519.pub"  # default; matching private key used for ssh

Per-repo defaults: <repo>/omnirun.toml

CLI flags always win over these.

[job]
name = "train"
outputs = ["checkpoints/*.pt", "results/**"]

[job.resources]
gpus = 1
gpu_type = "A100"      # or min_vram_gb = 40
time = "4h"            # accepts "90m", "2h30m", "1d2h", "00:30:00", bare minutes
cpus = 8
mem_gb = 32
disk_gb = 60

[job.env]
kind = "auto"          # auto | uv | pip | conda | system | none
                       # system = install into the ambient interpreter (Kaggle/
                       # Colab notebooks use this to keep their CUDA-matched torch)
setup = []             # shell lines before env creation (after backend env_setup)
pre_run = []           # shell lines inside the activated env, before the command

[job.env_vars]
WANDB_MODE = "offline"

CLI reference

Global: omnirun --config PATH <command> (default config: $OMNIRUN_CONFIG or ~/.config/omnirun/config.toml). Every command that takes a job accepts a unique id prefix.

omnirun submit [OPTIONS] -- COMMAND... — let the scheduler pick and place.

option meaning
--name N job name (default: first word of command); job id = <name>-<hex6>
--gpus N number of GPUs
--gpu-type T normalized GPU name (H100, A100-80, 4090, …)
--vram GB min per-GPU VRAM, alternative to --gpu-type
--time D estimated duration (90m, 15h, 2h30m) — drives cost math and Slurm --time
--cpus N / --mem GB / --disk GB CPU / RAM / disk requirements
--outputs GLOB output glob relative to repo root (repeatable)
--env K=V env var forwarded to the job (repeatable)
--backend NAME restrict to one configured backend
--push auto-push an unpushed HEAD to origin
--wait block until the job reaches RUNNING or a terminal state
--dry-run print the rendered payload (Slurm: full sbatch script) and exit

omnirun offers [resource flags] [--backend NAME] — probe and print the offer table without submitting (same resource flags as submit, minus policy flags). Use this to inspect options before committing.

omnirun serve [--host H] [--port P] — run the optional scheduler daemon in the foreground (background it yourself). Listens on a localhost TCP socket (default 127.0.0.1:8787, overridable in config or with these flags).

omnirun enqueue [OPTIONS] [--count N] -- COMMAND... — hand a job to the running daemon's queue. Takes all of submit's resource flags (--gpus, --gpu-type, --vram, --time, --cpus, --mem, --disk, --outputs, --env, --push) plus --count N (enqueue N copies) and --backend NAME (restrict placement to one backend).

omnirun queue [--wait] [--cancel JOB|all] [-A|--all-projects] — show the stored jobs (scoped to the current repo unless -A); --wait polls until every job is terminal then summarizes; --cancel cancels one job (id prefix) or all (project-scoped unless -A; an explicit id prefix is never scoped). --wait and enqueue need a running daemon; --cancel works with or without one.

omnirun ps [-A|--all-projects] — known jobs with refreshed statuses (scoped to the current repo unless -A, which adds a PROJECT column for the fleet).

omnirun status <job> — one job's details (backend, offer, repo sha, exit code, timestamps).

omnirun logs [-f|--follow] <job> — stream stdout+stderr; -f tails until the job finishes.

omnirun cancel <job> [--force] [--no-wait] — cancel a running job (marketplaces: also terminates the instance when auto_terminate is on). --force skips the graceful window and hard-kills; --no-wait just signals the cancel and returns, letting the next scheduler tick (or the daemon) release the held resource.

omnirun pull <job> [dest] — copy collected outputs locally (default ./omnirun-outputs/<job_id>); marketplaces auto-terminate after a successful pull.

omnirun gc [--all] — release remote resources of finished jobs (worktrees, leaked instances). --all also reaps non-terminal jobs, marking them LOST.

omnirun backends check [NAME] — config + connectivity sanity check per backend. For SSH/Slurm this establishes the ControlMaster session interactively, so 2FA prompts happen here, once.

omnirun backends discover [NAME] — probe each backend's live capabilities and health facts and cache them in the store (TTL-based; used by the scheduler for admission).

omnirun config-path — print the resolved config path and whether it exists.

Backend notes

slurm — everything is user-space over the login node: sbatch rendered locally and piped over a multiplexed SSH connection, status from squeue/sacct merged with the job-dir files, no admin cooperation needed. The SSH ControlMaster rides your existing 2FA/Duo/Kerberos session: run omnirun backends check once to authenticate, then background polls reuse the socket (and fail fast with a reconnect hint when it expires). Wait estimates are honest but rough — three tiers: idle matching nodes ("likely immediate"), your own historical waits for similar jobs, otherwise "unknown". Set root = "$SCRATCH/omnirun": venvs and worktrees do not fit in a typical HPC home quota.

ssh — any single machine you can ssh into. Runtime is a detached process (setsid+nohup, pidfile); status = job-dir files + PID liveness. Everything from ~/.ssh/config (ProxyJump, jump hosts, Match blocks) just works because omnirun shells out to the real OpenSSH binary. Declare the machine's GPUs in config; probe verifies them live via nvidia-smi and reports busy GPUs.

kaggle — genuinely free compute: ~30 GPU-hours/week on P100 or 2×T4, hard 12 h cap per batch session. Jobs run as private script kernels. Code delivery is decided per submit: a public repo is cloned by the kernel directly over its own internet connection (nothing shipped); a private (or unpushed) repo has its git bundle embedded (base64) inside the kernel's run.py — no separate dataset, no tokens leave your machine. Embedding sidesteps a Kaggle 409 race a dataset used to cause and its create/delete lifecycle; the one constraint (bundle case only) is a size cap on the embed, so only code-sized repos fit (data is never shipped — jobs fetch their own). A gitignored <repo>/.env is injected too (embedded base64, decoded to a 0600 file and sourced) — Kaggle now supports .env the same as Colab. omnirun reads your weekly GPU allowance live from Kaggle's quota API and marks GPU offers unfit only when the real remaining quota is exhausted (0h) — no local guessing or manual budget to keep in sync. L4/A100/H100 shapes exist but are gated behind a Colab-Pro-linked account; omnirun surfaces them with a "push may be rejected" warning. Needs a phone-verified account for GPU + internet kernels.

colab — automated through the official google-colab-cli (one-time OAuth, Linux/macOS only) — no tunnels, no scraping, nothing ToS-adjacent. Free tier is a T4 lottery with a ~12 h session reclaim; paid tiers burn compute units per session-hour (surfaced as an approximate cost note, not exact dollars). The CLI's keep-alive daemon runs on your machine — a sleeping laptop can lose an idle session, though a busy kernel mid-job counts as activity. Jobs should checkpoint; treat session death as normal.

runpod / vast / thunder — probe queries live prices, submit rents the cheapest fitting instance, runs the job over SSH, and the billing hygiene is deliberate: instances auto-terminate after a successful pull (and on cancel), omnirun gc reaps anything leaked, and an on-instance idle failsafe runs shutdown -h now after the job finishes plus a grace period (default 24 h) in case your client vanishes — note that on RunPod/Vast a stopped instance still bills disk until destroyed, so gc is what truly ends billing. Thunder is different in kind: virtualized GPU-over-TCP, compute-only CUDA (some CUDA APIs unimplemented, no graphics), possible slowdown vs bare metal, North America only — but very cheap and billed per-minute only while running. Vast offers churn: the one you picked can be taken between probe and submit — re-probe and pick again.

local — runs jobs on your own machine through the exact same pipeline (bare repo, worktree, bootstrap, detached process). Exists so you can test the whole flow, and your configs, without touching a network.

Limitations / non-goals (v0)

  • No data syncing — jobs own their data (download it in your command, or keep it on the cluster). Only code (git) goes in; only outputs globs come out. The one out-of-band exception is secrets: a gitignored <repo>/.env is shipped separately (never written into the shared tree) and exported into the job's environment, so API keys reach the worker without being committed.
  • Dirty trees are not shipped: submit requires a clean, pushed HEAD, so every job runs a real, reproducible revision. Commit (or stash) first — a dirty working tree is refused with no escape hatch.
  • No DAGs/pipelines, no multi-node jobs, no spot-preemption recovery, no image building, no artifact versioning, no web UI.
  • One job = one machine = one command. Cross-backend queueing now exists via the optional omnirun serve daemon, but warm-worker reuse (keeping a provisioned instance hot for the next queued job) is not built yet — every placement is a fresh one-shot submit.
  • Wait estimates (especially Slurm queues) are informed guesses, not promises.

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