CollectionGraphQL service for exposing OMOP CDM records.
Project description
GraphQL service for exposing OMOP CDM records.
Exported scripts
load-omop-cdm-db-records
run-omop-cdm-graphql-app
Step 1 - Create Python virtual environment
python3 -m venv venvStep 2 - Activate Python virtual environment
source venv/bin/activateStep 3 - Install
pip install omop-cdm-graphqlStep 4 - Update the configuration file
---
port: 8081
url: http://localhost
database_file: /tmp/omop-cdm-graphql/omop-cdm-v1.dbStep 5 - Copy configuration file to launch directory
cp venv/lib/python3.10/site-packages/omop_cdm_graphql/conf/config.yaml .Step 6 - Load the database
Run the loader to load mock records.
load-omop-cdm-db-recordsStep 7 - Run the app
run-omop-cdm-graphql-appStep 8 - Open browser
References
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omop_cdm_graphql-0.2.0.tar.gz
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