open-retrievals 0.0.11

Text Embeddings for Retrieval and RAG based on transformers

Documentation | 中文 | 日本語

Open-retrievals unify text embedding, retrieval, reranking and RAG. It's easy, flexible and scalable.

• Embedding fine-tuned through point-wise, pairwise, listwise, contrastive learning, and LLM.
• Reranking fine-tuned with Cross Encoder, ColBERT, and LLM.
• Easily build enhanced modular RAG, integrated with Transformers, Langchain, and LlamaIndex.

Exp	Model	Original	Finetuned	Demo
embed pairwise finetune	bge-base-zh-v1.5	0.657	0.703
embed LLM finetune (LoRA)	Qwen2-1.5B-Instruct	0.546	0.695
rerank cross encoder	bge-reranker-base	0.666	0.706
rerank colbert	bge-m3	0.657	0.695
rerank LLM (LoRA)	Qwen2-1.5B-Instruct	0.531	0.699

• The metrics is MAP in 10% eval t2-reranking data. Original LLM score is Zero-shot
• Read more examples

Installation

Prerequisites

pip install transformers
pip install faiss-cpu  # if necessary
pip install peft  # if necessary

With pip

pip install open-retrievals

With source code

python -m pip install -U git+https://github.com/LongxingTan/open-retrievals.git

Quick-start

Embeddings from pretrained weights

from retrievals import AutoModelForEmbedding

sentences = [
    'query: how much protein should a female eat',
    'query: summit define',
    "passage: As a general guideline, the CDC's average requirement of protein for women ages 19 to 70 is 46 grams per day. But, as you can see from this chart, you'll need to increase that if you're expecting or training for a marathon. Check out the chart below to see how much protein you should be eating each day.",
    "passage: Definition of summit for English Language Learners. : 1  the highest point of a mountain : the top of a mountain. : 2  the highest level. : 3  a meeting or series of meetings between the leaders of two or more governments."
]
model_name_or_path = 'intfloat/e5-base-v2'
model = AutoModelForEmbedding.from_pretrained(model_name_or_path, pooling_method="mean")
embeddings = model.encode(sentences, normalize_embeddings=True, convert_to_tensor=True)
scores = (embeddings[:2] @ embeddings[2:].T) * 100
print(scores.tolist())

Index building for dense retrieval search

from retrievals import AutoModelForEmbedding, AutoModelForRetrieval

sentences = ['A dog is chasing car.', 'A man is playing a guitar.']
model_name_or_path = "sentence-transformers/all-MiniLM-L6-v2"
index_path = './database/faiss/faiss.index'
model = AutoModelForEmbedding.from_pretrained(model_name_or_path)
model.build_index(sentences, index_path=index_path)

query_embed = model.encode("He plays guitar.")
matcher = AutoModelForRetrieval()
dists, indices = matcher.search(query_embed, index_path=index_path)
print(indices)

Rerank using pretrained weights

from retrievals import AutoModelForRanking

model_name_or_path: str = "BAAI/bge-reranker-base"
rerank_model = AutoModelForRanking.from_pretrained(model_name_or_path)
scores_list = rerank_model.compute_score(["In 1974, I won the championship in Southeast Asia in my first kickboxing match", "In 1982, I defeated the heavy hitter Ryu Long."])
print(scores_list)

RAG with LangChain integration

pip install langchain
pip install langchain_community
pip install chromadb

from retrievals.tools.langchain import LangchainEmbedding, LangchainReranker, LangchainLLM
from retrievals import AutoModelForRanking
from langchain.retrievers import ContextualCompressionRetriever
from langchain_community.vectorstores import Chroma as Vectorstore
from langchain.prompts.prompt import PromptTemplate
from langchain.chains import RetrievalQA

persist_directory = './database/faiss.index'
embed_model_name_or_path = "sentence-transformers/all-MiniLM-L6-v2"
rerank_model_name_or_path = "BAAI/bge-reranker-base"
llm_model_name_or_path = "microsoft/Phi-3-mini-128k-instruct"

embeddings = LangchainEmbedding(model_name=embed_model_name_or_path)
vectordb = Vectorstore(
    persist_directory=persist_directory,
    embedding_function=embeddings,
)
retrieval_args = {"search_type" :"similarity", "score_threshold": 0.15, "k": 10}
retriever = vectordb.as_retriever(**retrieval_args)

ranker = AutoModelForRanking.from_pretrained(rerank_model_name_or_path)
reranker = LangchainReranker(model=ranker, top_n=3)
compression_retriever = ContextualCompressionRetriever(
    base_compressor=reranker, base_retriever=retriever
)

llm = LangchainLLM(model_name_or_path=llm_model_name_or_path)

RESPONSE_TEMPLATE = """[INST]
<>
You are a helpful AI assistant. Use the following pieces of context to answer the user's question.<>
Anything between the following `context` html blocks is retrieved from a knowledge base.

    {context}

REMEMBER:
- If you don't know the answer, just say that you don't know, don't try to make up an answer.
- Let's take a deep breath and think step-by-step.

Question: {question}[/INST]
Helpful Answer:
"""

PROMPT = PromptTemplate(template=RESPONSE_TEMPLATE, input_variables=["context", "question"])

qa_chain = RetrievalQA.from_chain_type(
    llm,
    chain_type='stuff',
    retriever=compression_retriever,
    chain_type_kwargs={
        "verbose": True,
        "prompt": PROMPT,
    }
)

user_query = 'Introduce this'
response = qa_chain({"query": user_query})
print(response)

Fine-tune Embedding

import torch.nn as nn
from datasets import load_dataset
from transformers import AutoTokenizer, AdamW, get_linear_schedule_with_warmup, TrainingArguments
from retrievals import AutoModelForEmbedding, RetrievalTrainer, PairCollator, TripletCollator
from retrievals.losses import ArcFaceAdaptiveMarginLoss, InfoNCE, SimCSE, TripletLoss

model_name_or_path: str = "sentence-transformers/paraphrase-multilingual-mpnet-base-v2"
batch_size: int = 128
epochs: int = 3

train_dataset = load_dataset('shibing624/nli_zh', 'STS-B')['train']
train_dataset = train_dataset.rename_columns({'sentence1': 'query', 'sentence2': 'document'})
tokenizer = AutoTokenizer.from_pretrained(model_name_or_path, use_fast=False)
model = AutoModelForEmbedding.from_pretrained(model_name_or_path, pooling_method="cls")
# model = model.set_train_type('pointwise')  # 'pointwise', 'pairwise', 'listwise'
optimizer = AdamW(model.parameters(), lr=5e-5)
num_train_steps = int(len(train_dataset) / batch_size * epochs)
scheduler = get_linear_schedule_with_warmup(optimizer, num_warmup_steps=0.05 * num_train_steps, num_training_steps=num_train_steps)

training_arguments = TrainingArguments(
    output_dir='./checkpoints',
    num_train_epochs=epochs,
    per_device_train_batch_size=batch_size,
    remove_unused_columns=False,
)
trainer = RetrievalTrainer(
    model=model,
    args=training_arguments,
    train_dataset=train_dataset,
    data_collator=PairCollator(tokenizer, query_max_length=128, document_max_length=128),
    loss_fn=InfoNCE(nn.CrossEntropyLoss(label_smoothing=0.05)),
)
trainer.optimizer = optimizer
trainer.scheduler = scheduler
trainer.train()

Fine-tune cross-encoder reranking

from transformers import AutoTokenizer, TrainingArguments, get_cosine_schedule_with_warmup, AdamW
from retrievals import RerankCollator, AutoModelForRanking, RerankTrainer, RerankTrainDataset

model_name_or_path: str = "microsoft/deberta-v3-base"
max_length: int = 128
learning_rate: float = 3e-5
batch_size: int = 4
epochs: int = 3

train_dataset = RerankTrainDataset('./t2rank.json', positive_key='pos', negative_key='neg')
tokenizer = AutoTokenizer.from_pretrained(model_name_or_path, use_fast=False)
model = AutoModelForRanking.from_pretrained(model_name_or_path)
optimizer = AdamW(model.parameters(), lr=learning_rate)
num_train_steps = int(len(train_dataset) / batch_size * epochs)
scheduler = get_cosine_schedule_with_warmup(optimizer, num_warmup_steps=0.05 * num_train_steps, num_training_steps=num_train_steps)

training_args = TrainingArguments(
    learning_rate=learning_rate,
    per_device_train_batch_size=batch_size,
    num_train_epochs=epochs,
    output_dir='./checkpoints',
    remove_unused_columns=False,
)
trainer = RerankTrainer(
    model=model,
    args=training_args,
    train_dataset=train_dataset,
    data_collator=RerankCollator(tokenizer, max_length=max_length),
)
trainer.optimizer = optimizer
trainer.scheduler = scheduler
trainer.train()

Fine-tune ColBERT reranking

import os
import transformers
from transformers import (
    AdamW,
    AutoTokenizer,
    TrainingArguments,
    get_cosine_schedule_with_warmup,
)

from retrievals import ColBERT, ColBertCollator, RerankTrainer, RetrievalTrainDataset
from retrievals.losses import ColbertLoss

transformers.logging.set_verbosity_error()
os.environ["WANDB_DISABLED"] = "true"

model_name_or_path: str = "BAAI/bge-m3"
learning_rate: float = 5e-6
batch_size: int = 32
epochs: int = 3
colbert_dim: int = 1024
output_dir: str = './checkpoints'

train_dataset = RetrievalTrainDataset(
    'C-MTEB/T2Reranking', positive_key='positive', negative_key='negative', dataset_split='dev'
)
tokenizer = AutoTokenizer.from_pretrained(model_name_or_path, use_fast=False)
data_collator = ColBertCollator(
    tokenizer,
    query_max_length=128,
    document_max_length=256,
    positive_key='positive',
    negative_key='negative',
)
model = ColBERT.from_pretrained(
    model_name_or_path,
    colbert_dim=colbert_dim,
    loss_fn=ColbertLoss(use_inbatch_negative=False),
)

optimizer = AdamW(model.parameters(), lr=learning_rate)
num_train_steps = int(len(train_dataset) / batch_size * epochs)
scheduler = get_cosine_schedule_with_warmup(
    optimizer, num_warmup_steps=0.05 * num_train_steps, num_training_steps=num_train_steps
)

training_args = TrainingArguments(
    learning_rate=learning_rate,
    per_device_train_batch_size=batch_size,
    num_train_epochs=epochs,
    output_dir=output_dir,
    remove_unused_columns=False,
    logging_steps=100,
)
trainer = RerankTrainer(
    model=model,
    args=training_args,
    train_dataset=train_dataset,
    data_collator=data_collator,
)
trainer.optimizer = optimizer
trainer.scheduler = scheduler
trainer.train()

Reference & Acknowledge

• sentence-transformers
• Dense
• FlagEmbedding
• uniem
• BCEmbedding