openmassspec

openmassspec is a thin Python metapackage that bundles the OpenMassSpec vendor reader stack:

Vendor	Format	Underlying package
Thermo	`.raw` file	`opentfraw`
Bruker	`.d/` bundle	`opentimstdf`
Waters	`.raw/` dir	`openwraw`

Install

Install just what you need:

pip install openmassspec[thermo]
pip install openmassspec[bruker]
pip install openmassspec[waters]

Or install every supported vendor reader:

pip install openmassspec[all]

Usage

import openmassspec

kind = openmassspec.detect("/data/sample.raw")     # "thermo" | "bruker" | "waters" | None
run  = openmassspec.open_run("/data/sample.raw")    # vendor-specific reader object

open_run raises ImportError if the matching vendor extra is not installed and ValueError if the format cannot be detected.

License

Apache-2.0. See LICENSE.

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Publisher: publish.yml on Sigilweaver/OpenMassSpec

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- Subject digest: 30080796139233b812b06303feefc53e45b4506550808ecb05567b09a45b9f60
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- Permalink: Sigilweaver/OpenMassSpec@4f15aa7b936ec2f1cf0889fbe9d3e94eb3a7ef57
- Branch / Tag: refs/tags/v1.5.1
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