Rust reader for timsTOF .d/ (TDF) mass spectrometry bundles
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Project description
opentimstdf (Python bindings)
Python bindings for the OpenTimsTDF Rust crate.
pip install opentimstdf
import opentimstdf
reader = opentimstdf.Reader("my_bundle.d")
calib = reader.calibration()
frame = reader.frame(1)
for peak in reader.decode_peaks(frame):
mz = calib.tof_to_mz(peak.tof)
print(peak.scan, mz, peak.intensity)
See the docs site for the full API.
Build from source
Requires Rust 1.75+ and maturin:
cd python
maturin develop --release
License
Apache-2.0.
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