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Intuitive and powerful library for highly reproducible scientific data pipeline

Project description

Orcapod Python

Orcapod's Python library for developing reproducbile scientific pipelines.

Continuous Integration

This project uses GitHub Actions for continuous integration:

  • Run Tests: A workflow that runs tests on Ubuntu with multiple Python versions.

Running Tests Locally

To run tests locally:

# Install the package with test dependencies
pip install -e ".[test]"

# Run tests with coverage
pytest -v --cov=src --cov-report=term-missing

Development Setup

For development, you can install all optional dependencies:

# Install all development dependencies 
pip install -e ".[test,dev]"
# or
pip install -r requirements-dev.txt

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