Supporting python modules for the LatticeDNAOrigami simulation program
Python package for analysis, visualization, and support for the LatticeDNAOrigami simulation program. This package is part of the replication package for Ref. 1.
Some example scripts for creating plots are provided in the scripts directory.
Installation
This package was developed and used on Linux. It is available on the PyPI respository. It can be installed by running
pip install origamipy
If you do not have root access and it does not automatically default to installing locally, the --user flag may be used.
To install directly from this repository, run
python -m build
pip install dist/origamipy-[current version]-py3-none-any.whl
To run the above, it may be necessary to update a few packages:
python3 -m pip install --upgrade pip setuptools wheel
For more information on building and installing python packages, see the documentation from the Python Packaging Authority.
References
[1] A. Cumberworth, D. Frenkel, and A. Reinhardt, Simulations of DNA-origami self-assembly reveal design-dependent nucleation barriers (2022).
Links
1 maintainer
Metadata
1 maintainer
Release files for origamipy 1.1.2
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| origamipy-1.1.2.tar.gz | 51.0 kB | Without provenance | Details for origamipy-1.1.2.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| origamipy-1.1.2-py3-none-any.whl | Python 3 | none | any | Details for origamipy-1.1.2-py3-none-any.whl |
Total release size: 83.5 kB
Release files / origamipy-1.1.2.tar.gz
| Download URL | origamipy-1.1.2.tar.gz |
|---|---|
| Size | 51.0 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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No |
| Uploaded via |
twine/3.8.0 pkginfo/1.8.2 readme-renderer/32.0 requests/2.27.1 requests-toolbelt/0.9.1 urllib3/1.26.9 tqdm/4.62.3 importlib-metadata/4.8.1 keyring/23.5.0 rfc3986/2.0.0 colorama/0.4.5 CPython/3.10.5
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Release files / origamipy-1.1.2-py3-none-any.whl
| Download URL | origamipy-1.1.2-py3-none-any.whl |
|---|---|
| Size | 32.5 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.8.0 pkginfo/1.8.2 readme-renderer/32.0 requests/2.27.1 requests-toolbelt/0.9.1 urllib3/1.26.9 tqdm/4.62.3 importlib-metadata/4.8.1 keyring/23.5.0 rfc3986/2.0.0 colorama/0.4.5 CPython/3.10.5
|
Security for origamipy 1.1.2
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