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oss-intake

ci codeql OpenSSF Scorecard PyPI OpenSSF Best Practices

Evidence for deciding whether to adopt, keep or replace an open source component. oss-intake runs Trivy and Grype, checks OSV, and turns the results into a reading order: malicious packages and exploited vulnerabilities first, findings that apply only under stated conditions separately, the rest as routine. It adds what a scanner alone does not: how long fixes have existed without being shipped, public exploit evidence, the advisory's own conditions, reachability for Go binaries, and project health.

oss-intake report on a lockfile with six compromised npm releases: six malicious packages flagged first

See the live sample report: six trusted npm packages (chalk, debug, @ctrl/tinycolor, ua-parser-js, event-stream, flatmap-stream), one compromised release of each, all flagged as malicious. Read why that is the case for scanning on a schedule, not once at approval.

Quickstart

pipx install oss-intake
# install Trivy and Grype, pinned and verified: see "Install the scanners yourself" below
oss-intake scan --path package-lock.json --out report
oss-intake scan --image <image:tag> --repo <owner/name> --out report

Open report/report.html. The full list, with triage columns for the assessor, is report/findings.csv.

What it answers

  1. Is any of it malicious? Package versions known as malware, from the OpenSSF malicious packages database or advisories classed as embedded malicious code.
  2. Is it vulnerable, and what matters first? Known vulnerabilities in a container image, an artifact or a lockfile, with exploit evidence and a suggested triage group for each.
  3. Does the project patch? Whether fixes that exist upstream are being shipped, how long they have been available, and how active the project is.

The third question is what a scanner alone does not answer. oss-intake measures release lag: findings where the fixed version of a dependency was already published before the project's release, so the project could have shipped it and did not. It then adds project health signals (release cadence, OpenSSF Scorecard, CISA KEV membership).

What it does

  • Runs Trivy and, if installed, Grype against an image, and queries OSV.dev for the language packages Trivy found.
  • Merges the results into one row per vulnerability, package and version, recording which sources saw it.
  • Looks up when each fixed dependency version was published (deps.dev) and compares that with the project's GitHub release date.
  • Reports release cadence from the GitHub API and the OpenSSF Scorecard score where one exists.
  • Audits the project's own GitHub Actions workflows: unpinned actions, known-bad action versions (such as the compromised trivy-action tags), missing or write-all token permissions, and pull_request_target triggers.
  • Optionally suggests a likelihood value for a 5x5 risk matrix from configurable rules, clearly labelled as a heuristic.
  • Writes findings.csv, summary.md, assessment.json and a self-contained report.html, plus the raw scanner output under raw/ as evidence.
  • Applies integrity checks to the scanners it runs: version pinning, a known-bad version list, SHA-256 verification and optional Sigstore (cosign) verification.

What it does not do

  • It does not prove exploitability. Scanners match component versions against advisory databases. A finding means a version is listed as affected, not that the vulnerable code is reachable or exposed in your deployment. The CSV has triage_* columns for the assessor's decisions, which carry over to the next run.
  • It does not install, download, bundle or redistribute scanners. You install them; it verifies them.
  • It does not assess licences, secrets or misconfiguration, and it does not detect new malware. Package versions already known as malware are flagged as malicious: listed in the OpenSSF malicious packages database (OSV MAL- entries), or covered by an advisory classed as embedded malicious code (CWE-506), as the compromised ua-parser-js 0.7.29 and event-stream 3.3.6 releases are.
  • It does not give a risk rating. The likelihood suggestion is a starting point for an assessor.
  • It does not fix anything or open issues upstream.

Install

Python 3.10 or later on Windows, macOS or Linux. No administrator rights are needed.

pipx install oss-intake

Releases are published to PyPI from GitHub Actions through trusted publishing, so PyPI shows each file's provenance (which workflow in this repository built it). Each GitHub release also carries a Sigstore signature bundle (.sigstore.json) for every file, verifiable with sigstore-python.

Windows PowerShell without pipx:

py -m pip install --user pipx
py -m pipx ensurepath
# open a new terminal, then
pipx install oss-intake

If oss-intake is "not recognized" after pip install --user, the per-user Scripts folder is not on PATH. Either add it, or run the tool through Python, which works everywhere:

py -m oss_intake --help

Install the scanners yourself, pinned and verified

Install a specific version of each scanner from its official GitHub release, never "latest", and verify the download before you extract it. oss-intake verify does the hash comparison correctly on any platform (checksum files are served as application/octet-stream; they are parsed as bytes, with BOM and CRLF handled):

oss-intake verify --file trivy_0.76.1_windows-64bit.zip --checksums trivy_0.76.1_checksums.txt

Then record the SHA-256 of the extracted executable and pass it on every run (oss-intake doctor prints it):

oss-intake doctor

Trivy versions 0.69.4, 0.69.5 and 0.69.6 were malicious (CVE-2026-33634, March 2026). oss-intake refuses to run any version on its known-bad list.

Usage

oss-intake --image owner/app:1.2.3 --repo owner/app --out ./reports \
  --image-src remote --trivy-version 0.76.1 --trivy-sha256 <sha256-of-trivy-executable> --likelihood

PowerShell (backtick continues a line):

$env:GITHUB_TOKEN = "<optional token, raises the GitHub API rate limit>"
oss-intake --image owner/app:1.2.3 --repo owner/app --out .\reports `
  --image-src remote --trivy-version 0.76.1 --trivy-sha256 <sha256> --likelihood

Without a container image, assess a file or folder directly with --path:

oss-intake --path ./vendor-app-2.4.1.jar --repo owner/app --out ./reports   # JAR, WAR, EAR or binary
oss-intake --path ./requirements.txt --repo owner/app --release-tag v1.4.0 --out ./reports
oss-intake --path ./renv.lock --repo owner/app --release-tag v1.4.0 --out ./reports

A JAR, WAR, EAR or binary is scanned as built artifacts (Trivy rootfs, Grype dir:), and a version in its file name is tried as the release tag. Lockfiles the scanners understand (Python, npm, Maven, Go, Rust, PHP, Ruby, .NET) are scanned with Trivy fs. An R renv.lock is read by oss-intake and checked against OSV's CRAN advisories, since neither scanner reads it; packages from Bioconductor, GitHub or local sources are listed as not checked. A folder is scanned as built artifacts; for a source checkout, pass its lockfile. Release lag needs the project's release: --repo with --release-tag, or --release-date.

Package inventory

To check the open source an organisation already uses, pass a CSV list of packages, for example exported from Artifactory or Nexus, or kept in a spreadsheet (save it from Excel as "CSV UTF-8"):

oss-intake --path ./packages.csv --out ./reports
ecosystem,name,version,owner,system
npm,@ctrl/tinycolor,4.1.1,Web team,Customer portal
pypi,django,3.2.0,Data team,Reporting
maven,org.apache.logging.log4j:log4j-core,2.14.1,Platform team,Payments

Use either ecosystem, name and version columns, or one purl column (pkg:npm/chalk@5.6.1). Ecosystems: npm, pypi, maven (group:artifact), go, nuget, cargo, gem, composer, cran, hex and pub, plus common aliases such as python or java. Versions must be exact: ranges such as ^1.2 or latest are rejected. Any other column (owner, system, team...) is carried through to the reports as a label. Every row is validated first: if any row is invalid, the run stops and lists each problem with its row number, before anything is looked up.

No scanner is needed: each package version is checked against OSV, so malicious releases are flagged as well as vulnerable ones. Besides the usual reports, packages.csv lists every package, worst first, with its findings and label columns, and an upgrade comparison:

  • Upgrade to at least: the lowest version that fixes every listed vulnerability with a fix, and what is still known to affect that version (1.2.0 · 1 known means the minimum fix is not enough on its own).
  • Latest release: the package's current release on deps.dev and what is known to affect it. Skip this lookup (one request per package) with --no-latest to see the current state and the minimum fix only.
  • major: the upgrade crosses a major version, or a minor version below 1.0, so expect breaking changes.

Fewer known vulnerabilities is not proof that a version is safe: it may be less studied, or newer than the advisories. The HTML report shows the packages that need attention. Run it on a schedule: a package that was clean when approved can turn out vulnerable or compromised later. A sample is in examples/inventory.

All inputs are validated before any scanner runs. The image must carry an explicit tag or digest.

Option Purpose
--out Output directory (required)
--image Image with explicit tag or digest
--path A JAR, WAR, binary, folder, lockfile, renv.lock or package inventory .csv instead of an image
--reachability, --govulncheck-path Check Go binaries with govulncheck (see Go reachability)
--repo GitHub owner/name (a full GitHub URL is accepted)
--image-src remote Pull from the registry without Docker installed (Trivy --image-src remote, Grype registry:)
--platform Image platform for both scanners (default linux/amd64, so Apple Silicon scans the same variant as a server); '' uses scanner defaults
--scanners auto (default: Trivy and OSV, plus Grype if found) or a list such as trivy,grype,osv
--trivy-version, --grype-version Required scanner version; the run fails on mismatch
--trivy-sha256, --grype-sha256 Expected SHA-256 of the executable
--trivy-cosign-bundle, --grype-cosign-bundle Verify a Sigstore bundle with cosign (cosign must be on PATH)
--trivy-arg, --grype-arg Pass extra arguments, e.g. --trivy-arg=--db-repository=ghcr.io/aquasecurity/trivy-db:2
--from-trivy-json, --from-grype-json Use an existing JSON report instead of running the scanner
--release-tag, --release-date Set the release the image corresponds to, when tags do not match
--grace-days A fix must predate the release by this many days to count as missed (default 14)
--unshipped-days Days a fix must be public, with no newer release, to count as unshipped (default 90)
--as-of Fix the assessment date for reproducible reports
--min-severity Drop findings below a severity
--formats Any of csv,md,json,html (default all; findings.csv is always written)
--offline No network enrichment (OSV, deps.dev, GitHub, Scorecard, KEV, EPSS, exploit sources)
--no-epss, --no-kev, --no-scorecard, --no-fix-dates, --no-exploits Skip one enrichment source
--no-latest Package inventories: skip the latest-release lookup (the minimum fix is still checked)
--decisions FILE Carry assessor decisions into this run: an earlier findings.csv with the triage columns filled in, or OpenVEX
--no-workflows Skip the audit of the project's GitHub Actions workflows
--trivy-path, --grype-path Use a scanner executable that is not on PATH
--trivy-cosign-identity, --grype-cosign-identity Certificate identity (regexp) the cosign bundle must match
--timeout Seconds before a scanner run is abandoned (default 1800)
--top Number of findings listed in the summary (default 25; all are in findings.csv)
--quiet Print only the result line and errors
--likelihood, --likelihood-config FILE Add the 5x5 likelihood heuristic, with optional custom rules
--fail-on-likelihood N Exit code 3 when the suggestion is N or higher, for pipelines
--sbom Also write a CycloneDX SBOM to raw/

Other commands: oss-intake doctor (scanner paths, versions, hashes and known-bad status; --trivy-path and --grype-path as for scan) and oss-intake verify, which checks a downloaded file:

verify option Purpose
--file The downloaded file to check (required)
--checksums A sha256sum-style checksums file from the release, e.g. trivy_0.76.1_checksums.txt
--sha256 An expected SHA-256 instead of a checksums file
--name The entry to look up in the checksums file (default: the file's name)
--cosign-bundle, --cosign-identity Also verify a Sigstore bundle with cosign, against a certificate identity regexp

Exit codes: 0 success, 1 error (including any integrity failure), 2 invalid input, 3 likelihood threshold reached.

GITHUB_TOKEN is optional. It is only sent to api.github.com, and it is never logged or written to reports.

How release lag is measured

For each finding with a fix, oss-intake picks the nearest fixed version above the installed one (so a fix on an older branch is not counted for a newer one) and looks up when that version was published.

Metric Meaning
Fix exists upstream A fixed version of the dependency is known
Fix existed before release The fixed version was published at least --grace-days (14) days before the project's release: the project could reasonably have shipped it
Fix within grace period Published in the 14 days before release; shown but not counted as missed
Unshipped Forward-looking: the fix has been public for --unshipped-days (90) or more and the scanned release is still the project's latest
Likely already fixed Installed version equals a listed fix apart from a build label such as .jre11; flagged and excluded from lag
Fix published after release The fix arrived later; this is normal lag for the next release
Days a fix has been available Assessment date minus the fixed version's publish date
CVE published before release Secondary signal. A CVE can be public before any fix exists, so this overstates lag on its own

Fix dates come from deps.dev for language packages, from Packagist for PHP Composer packages, falling back to the GitHub release date for Go modules hosted on GitHub that deps.dev does not index. For Debian packages they come from the Debian security advisory that shipped the fix (DSA or DLA, by the scanner's advisory ID or the exact fixed version), dated from the Debian security tracker's advisory lists, with OSV as a fallback. Fixes that shipped without an advisory are dated from the Debian point release (13.6 and so on) that included the fixed version, from the suite's ChangeLog; fixes still in proposed-updates stay unknown, with a note. For Ubuntu packages they come from the Ubuntu Security Notice (USN) that fixed the CVE in that release and source package at that version, found through OSV; failing that, from Launchpad's publishing history: when that exact version was first published to the release in the Release, Security or Updates pocket. For RHEL and UBI packages they come from the Red Hat advisory (RHSA) that Trivy reports, dated from Red Hat's CSAF document. For Alpine packages they come from the aports commit history on the image's release branch: a commit naming the CVE, or the fixed version for a new upstream release (set GITHUB_TOKEN, one request per package). For the Go standard library they come from the Go release history (go.dev/doc/devel/release). Packages with no dated source yet, currently Amazon Linux and runtimes detected only from a binary, are counted as "fix date unknown" rather than guessed. The fix_date_source column in findings.csv shows where each date came from.

Example output

Taken from the synthetic test fixtures (tests/fixtures, fictional project example/webapp) so it shows the format, not a judgement of any real project. This section is regenerated from the code by scripts/readme_sync.py, and the test suite fails if it falls out of date. A real report on six compromised npm releases is in the live sample.

findings=7 critical=2 high=4 with_fix=6 fix_before_release=4 fix_date_unknown=0 likelihood=5(Almost certain,confidence=normal)
Group ID Severity CVSS Exploit Package Installed Fix Fix before release Days fix available
Act now CVE-2099-0003 HIGH 7.5 (3.1, ghsa) known exploited io.netty:netty-codec-http 4.1.100.Final 4.1.108.Final yes 244
Act now CVE-2099-0005 HIGH 7.5 (3.1, ghsa) weaponised com.fasterxml.jackson.core:jackson-databind 2.17.0 2.17.1 yes 221
Act now CVE-2099-0002 HIGH 7.5 (3.1, ghsa) weaponised com.fasterxml.jackson.core:jackson-databind 2.17.0 2.17.2 no 129
Review CVE-2099-0001 CRITICAL 9.8 (3.1, ghsa) none indexed org.springframework:spring-web 6.1.10 6.1.12 yes 290
Review CVE-2099-0006 CRITICAL 9.8 (3.1, ghsa) public exploit com.fasterxml.jackson.core:jackson-databind 2.17.0 2.17.3 no 113
Routine CVE-2099-0004 HIGH 7.1 (3.1, ghsa) proof of concept org.springframework:spring-web 6.1.10 none no fix n/a
Routine CVE-2099-1000 MEDIUM 7.5 (3.1, ghsa) none indexed libc6 2.39-0ubuntu8.4 2.39-0ubuntu8.5 yes 254

The summary also covers scope (scanner versions, database dates, hash verification), project health, agreement between sources and any warnings. See docs/validation.md for checking the tool against a real public image.

Exploit availability and advisory conditions

Each finding gets the strongest public exploit evidence found: known exploited (CISA KEV), weaponised (a Metasploit module or Nuclei template), public (Exploit-DB), proof of concept (GitHub repositories only, which are noisy and sometimes malicious), or none indexed. "None indexed" means none was found in those sources, not that none exists; when a source cannot be reached the finding is "not checked" instead. The conditions column quotes the advisory's own statement of when the finding applies (for example "only if the application uses XsltView"), word for word, so the assessor can check it against the deployment.

Go reachability (optional)

With --reachability, Go binaries in the scan are checked with Go's official govulncheck in binary mode, which reports whether a vulnerable function is actually linked into the binary. Install it yourself (go install golang.org/x/vuln/cmd/govulncheck@v1.1.4); oss-intake never downloads it. For an image, the binaries are copied out with Docker (docker create and docker cp) or crane export. A finding whose vulnerable functions are absent from every binary it was seen in is marked "not reachable" and set aside in triage, with the govulncheck ID as the reason; one whose function is present is marked "reachable". Counts and likelihood do not change: the vulnerable version is still shipped. This covers Go only; for other languages the advisory conditions are the assessor's guide.

Suggested triage

Each finding is placed in one group, with its reason, as a reading order for the engineer: Act now (a known malicious package, CISA KEV, or a Metasploit or Nuclei exploit), Review (an Exploit-DB exploit, EPSS 0.1 or more, or a critical whose advisory states no conditions), Check conditions (the advisory says when it applies; confirm against the deployment), Routine (none of these) and Set aside (only with evidence: a kernel header package, the installed version already matches a fix, govulncheck shows the vulnerable function is not in the binary, or the assessor recorded the finding as not affected or fixed). No group says a finding carries no risk.

Carrying decisions between runs

Scanning on a schedule only works if a finding assessed once does not have to be assessed again. Each run's findings.csv has three columns for the assessor:

Column Values
triage_status not_affected, affected, fixed or under_investigation (OpenVEX statuses; "false positive", "risk accepted", "patched" and "investigating" are accepted too)
triage_notes Why. Required for not_affected
triage_reachable no records that the vulnerable code is not in the execution path

Fill them in for the findings you have assessed, then pass the file to the next run:

oss-intake --image owner/app:1.5.0 --repo owner/app --out ./reports-2 --decisions ./reports-1/findings.csv

Each decision applies to the same vulnerability (by ID or alias) in the same package. not_affected and fixed set the finding aside, with the note as the reason; affected and under_investigation keep its group and add the note. A decision made for another installed version still applies but is marked for review, a decision whose vulnerability is no longer found is listed as resolved, and a decision never sets aside a malicious package. Decisions are validated before anything is scanned.

The new findings.csv comes out with the decisions filled in (and triage_decided_version), so the next run takes it as is and only new findings are blank. Every run with decisions also writes openvex.json (OpenVEX v0.2.0), which Grype and Trivy can read (--vex); an OpenVEX file is accepted as --decisions too.

Likelihood heuristic

Off by default. With --likelihood, the first matching rule wins:

Level Default rule
5 Almost certain A package listed as malicious (OpenSSF malicious packages, or a CWE-506 advisory) is present
5 Almost certain A known-exploited (CISA KEV) vulnerability has a fix the project has not shipped
4 Likely A finding with an upstream fix has a ready-to-use public exploit (Metasploit module or Nuclei template)
4 Likely A finding with an upstream fix has a high predicted exploitation probability (EPSS 0.5 or more)
4 Likely Critical fixes were available before release and the project shows weak upkeep
4 Likely Critical fixes have been available for a long time and the project has not released since
3 Possible A finding with an upstream fix has a notable predicted exploitation probability (EPSS 0.1 or more)
3 Possible A finding with an upstream fix has a published exploit (Exploit-DB)
3 Possible Critical, or several high, fixes were available before release and not shipped
3 Possible Critical, or many high, fixes have been available upstream for a long time with no newer release
2 Unlikely High or critical findings exist with upstream fixes
1 Rare No high or critical findings with available fixes

Unknown signals (no Scorecard score, say) never trigger a rule. To use your own rules, copy DEFAULT_CONFIG from likelihood.py into a JSON file and pass --likelihood-config.

The available metrics are archived, critical_fix_at_release, critical_fix_unshipped, critical_with_fix, days_since_latest_release, fix_date_unknown, high_fix_at_release, high_fix_unshipped, high_with_fix, kev_with_fix, malicious, max_days_fix_available, max_epss_with_fix, public_exploit_with_fix, release_date_known, scanned_is_latest, scorecard_score, weaponised_with_fix and with_fix.

Limitations

  • Results depend on the scanners' vulnerability databases and drift as those databases update. The report records scanner and database versions so a result can be reproduced or explained.
  • Trivy and Grype detect packages independently, so their disagreement is informative. OSV is queried with Trivy's package list, so it is an independent database check, not an independent detector.
  • Severity is the highest any source reported, which is conservative. Per-source severities are in the CSV.
  • Kernel CVEs reported against kernel header packages (linux-libc-dev and similar) are excluded from lag and likelihood, because a container uses the host's kernel. They stay in findings.csv with a note; assess the host kernel separately. Use --include-kernel-headers to count them.
  • Version comparison is ecosystem-agnostic and approximate. It only affects which fix date is used. Build labels (.jre11, -jre, -android) are ignored when comparing.
  • Scanners can read a JAR's version without its build label and report an already-fixed build as vulnerable (seen with mssql-jdbc 12.10.2.jre11). These rows are kept, marked in the note column and excluded from lag. OSV inherits the same mistake because it is queried with the scanner's version.
  • The OpenSSF Scorecard API only covers repositories in its scheduled dataset. "Not scored" is not a negative signal.
  • Release matching expects GitHub releases whose tags resemble the image tag (1.2.3, v1.2.3, name-1.2.3, release-1.2.3), and also tries the tag without a variant suffix (2.528-jdk21 matches jenkins-2.528). If nothing matches, lag metrics are not computed rather than measured against the wrong release. Use --release-tag or --release-date in that case. Failing both, the image's build date is used and labelled "image build date": lag then means "fixes that existed when the image was built" (disable with --no-image-date).
  • Fix dates are unavailable for Amazon Linux and for runtimes found only in binaries. When more than half of the fixes lack a date, the likelihood suggestion is marked low confidence: read it as "not enough evidence", not "low risk".
  • Only GitHub-hosted projects get health signals in this version.
  • Trivy does not catalogue installed R (CRAN) packages, so R libraries inside an image are not assessed.
  • Runtimes detected from binaries (binary in the coverage table) have no package registry to date fixes from, so they always show as "fix date unknown".

Planned work is in BACKLOG.md.

Licence

Apache License 2.0. See LICENSE.

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A note on package security

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To learn more about protecting yourself from malicious actors, visit our package security documentation.

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