path-finder-retrosynthesis 1.0.0

Retrosynthesis route finder — AiZynthFinder + Rxn-INSIGHT + Chemistry by Design

path_finder

This package aims to find the best retro synthesis pathways for some drugs, based on criteria selected by the user.

🔥 Usage

from mypackage import main_func

# One line to rule them all
result = main_func(data)

This usage example shows how to quickly leverage the package's main functionality with just one line of code (or a few lines of code). After importing the main_func (to be renamed by you), you simply pass in your data and get the result (this is just an example, your package might have other inputs and outputs). Short and sweet, but the real power lies in the detailed documentation.

👩‍💻 Installation

Create a new environment, you may also give the environment a different name.

conda create -n path_finder python=3.10 

conda activate path_finder
(conda_env) $ pip install .

If you need jupyter lab, install it

(path_finder) $ pip install jupyterlab

🛠️ Development installation

Initialize Git (only for the first time).

Note: You should have create an empty repository on https://github.com:YaraChahda/path_finder.

git init
git add * 
git add .*
git commit -m "Initial commit" 
git branch -M main
git remote add origin [e-mail]:YaraChahda/path_finder.git 
git push -u origin main

Then add and commit changes as usual.

To install the package, run

(path_finder) $ pip install -e ".[test,doc]"

Run tests and coverage

(conda_env) $ pip install tox
(conda_env) $ tox