pdbnucleicacids 0.1.0

A Biopython based package that constructs and represent all nucleic acids in a PDB structure, with a special focus on base-pair representation.

A Biopython based package that constructs and represent all nucleic acids in a PDB structure, with a special focus on base-pair representation.

• Free software: MIT license

• Documentation: https://pdbnucleicacids.readthedocs.io.

Features

• TODO

TODO

• Add a module similar to Polypeptide from Biopython, but for nucleic acids, with

  • class Nucleic or NucleicAcid

  • class NucleicBuilder or NucleicAcidBuilder

  • class PairedNucleic or PairedNucleicAcid or DoubleStrandNucleic or DoubleStrandNucleicAcid

• regarding BasePairsRules:

  • Distinguish between DNA and RNA bases (i.e. Deodyribose Adenine can pair with both Deoxyribose Thyamine or Ribose Thyamine)

• Proper tests (WIP)

Credits

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.