pdf-file-renamer 0.6.2

Intelligent PDF renaming using LLMs with DOI-based naming and interactive workflow

PDF Renamer

Intelligent PDF file renaming using LLMs and DOI metadata. Automatically generate clean, descriptive filenames for your PDF library.

🚀 Works with OpenAI, Ollama, LM Studio, and any OpenAI-compatible API 📚 DOI-first approach for academic papers - no API costs! 🎯 Interactive mode with retry, edit, and skip options

Table of Contents

• Quick Example
• Features
• Installation
• Configuration
• Usage
• Interactive Mode
• How It Works
• Cost Considerations
• Architecture
• Development
• Contributing
• License

Quick Example

Transform messy filenames into clean, organized ones:

Before:                               After:
📄 paper_final_v3.pdf          →     Leroux-Analog-In-memory-Computing-2025.pdf
📄 download (2).pdf            →     Ruiz-Why-Don-Trace-Requirements-2023.pdf
📄 document.pdf                →     Raspail-Camp_of_the_Saints.pdf

Live Progress Display:

Processing 3 PDFs with max 3 concurrent API calls and 10 concurrent extractions

╭─────────────────────────── 📊 Progress ───────────────────────────╮
│ Total: 3 | Pending: 0 | Extracting: 0 | Analyzing: 0 | Complete: 3 │
╰───────────────────────────────────────────────────────────────────╯
╭───────────────────────────────────────────────────────────────────╮
│ [██████████████████████████████████████████████] 100.0%           │
╰───────────────────────────────────────────────────────────────────╯
                          Processing Status
┏━━━━━━━━━━━━━━━━━━━━┳━━━━━━━┳━━━━━━━━━━┳━━━━━━━━━━━━━━━━━━━━━┓
┃ File               ┃ Stage ┃ Status   ┃ Details             ┃
┡━━━━━━━━━━━━━━━━━━━━╇━━━━━━━╇━━━━━━━━━━╇━━━━━━━━━━━━━━━━━━━━━┩
│ paper_final_v3.pdf │   ✓   │ Complete │ very_high           │
│ download (2).pdf   │   ✓   │ Complete │ very_high (DOI)     │
│ document.pdf       │   ✓   │ Complete │ high                │
└────────────────────┴───────┴──────────┴─────────────────────┘

Features

• 🎓 DOI-based naming - Automatically extracts DOI and fetches authoritative metadata for academic papers
• 🧠 Advanced PDF parsing using docling-parse for better structure-aware extraction
• 👁️ OCR fallback for scanned PDFs with low text content
• 🎯 Smart LLM prompting with multi-pass analysis for improved accuracy
• ⚡ Hybrid approach - Uses DOI metadata when available, falls back to LLM analysis for other documents
• 📝 Standardized format - Generates filenames like Author-Topic-Year.pdf
• 🔍 Dry-run mode to preview changes before applying
• 💬 Enhanced interactive mode with options to accept, manually edit, retry, or skip each file
• 📊 Live progress display with concurrent processing for speed
• ⚙️ Configurable concurrency limits for API calls and PDF extraction
• 📦 Batch processing of multiple PDFs with optional output directory

Installation

Quick Start (No Installation Required)

# Run directly with uvx
uvx pdf-renamer --dry-run /path/to/pdfs

Install from PyPI

# Using pip
pip install pdf-file-renamer

# Using uv
uv pip install pdf-file-renamer

Install from Source

# Clone and install
git clone https://github.com/nostoslabs/pdf-renamer.git
cd pdf-renamer
uv sync

Configuration

Configure your LLM provider:

Option A: OpenAI (Cloud)

cp .env.example .env
# Edit .env and add your OPENAI_API_KEY

Option B: Ollama or other local models

# No API key needed for local models
# Either set LLM_BASE_URL in .env or use --url flag
echo "LLM_BASE_URL=http://patmos:11434/v1" > .env

Usage

Quick Start

# Preview renames (dry-run mode)
pdf-renamer --dry-run /path/to/pdf/directory

# Actually rename files
pdf-renamer --no-dry-run /path/to/pdf/directory

# Interactive mode - review each file
pdf-renamer --interactive --no-dry-run /path/to/pdf/directory

Using uvx (No Installation)

# Run directly without installing
uvx pdf-renamer --dry-run /path/to/pdfs

# Run from GitHub
uvx https://github.com/nostoslabs/pdf-renamer --dry-run /path/to/pdfs

Options

• --dry-run/--no-dry-run: Show suggestions without renaming (default: True)
• --interactive, -i: Interactive mode with rich options:
  • Accept - Use the suggested filename
  • Edit - Manually modify the filename
  • Retry - Ask the LLM to generate a new suggestion
  • Skip - Skip this file and move to the next
• --model: Model to use (default: llama3.2, works with any OpenAI-compatible API)
• --url: Custom base URL for OpenAI-compatible APIs (default: http://localhost:11434/v1)
• --pattern: Glob pattern for files (default: *.pdf)
• --output-dir, -o: Move renamed files to a different directory
• --max-concurrent-api: Maximum concurrent API calls (default: 3)
• --max-concurrent-pdf: Maximum concurrent PDF extractions (default: 10)

Examples

Using OpenAI:

# Preview all PDFs in current directory
uvx pdf-renamer --dry-run .

# Rename PDFs in specific directory
uvx pdf-renamer --no-dry-run ~/Documents/Papers

# Use a different OpenAI model
uvx pdf-renamer --model gpt-4o --dry-run .

Using Ollama (or other local models):

# Using Ollama on patmos server with gemma model
uvx pdf-renamer --url http://patmos:11434/v1 --model gemma3:latest --dry-run .

# Using local Ollama with qwen model
uvx pdf-renamer --url http://localhost:11434/v1 --model qwen2.5 --dry-run .

# Set URL in environment and just use model flag
export LLM_BASE_URL=http://patmos:11434/v1
uvx pdf-renamer --model gemma3:latest --dry-run .

Other examples:

# Process only specific files
uvx pdf-renamer --pattern "*2020*.pdf" --dry-run .

# Interactive mode with local model
uvx pdf-renamer --url http://patmos:11434/v1 --model gemma3:latest --interactive --no-dry-run .

# Run directly from GitHub
uvx https://github.com/nostoslabs/pdf-renamer --no-dry-run ~/Documents/Papers

Interactive Mode

When using --interactive mode, you'll be presented with each file one at a time with detailed options:

================================================================================
Original: 2024-research-paper.pdf
Suggested: Smith-Machine-Learning-Applications-2024.pdf
Confidence: high
Reasoning: Clear author and topic identified from abstract
================================================================================

Options:
  y / yes / Enter - Accept suggested name
  e / edit - Manually edit the filename
  r / retry - Ask LLM to generate a new suggestion
  n / no / skip - Skip this file

What would you like to do? [y]:

This mode is perfect for:

• Reviewing suggestions before applying them
• Fine-tuning filenames that are close but not quite right
• Retrying when the LLM suggestion isn't good enough
• Building confidence in the tool before batch processing

You can use interactive mode with --dry-run to preview without actually renaming files, or with --no-dry-run to apply changes immediately after confirmation.

How It Works

Intelligent Hybrid Approach

The tool uses a multi-strategy approach to generate accurate filenames:

1. DOI Detection (for academic papers)

   • Searches PDF for DOI identifiers using pdf2doi
   • If found, queries authoritative metadata (title, authors, year, journal)
   • Generates filename with very high confidence from validated metadata
   • Saves API costs - no LLM call needed for papers with DOIs

2. LLM Analysis (fallback for non-academic PDFs)

   • Extract: Uses docling-parse to read first 5 pages with structure-aware parsing, falls back to PyMuPDF if needed
   • OCR: Automatically applies OCR for scanned PDFs with minimal text
   • Metadata Enhancement: Extracts focused hints (years, emails, author sections) to supplement unreliable PDF metadata
   • Analyze: Sends full content excerpt to LLM with enhanced metadata and detailed extraction instructions
   • Multi-pass Review: Low-confidence results trigger a second analysis pass with focused prompts
   • Suggest: LLM returns filename in Author-Topic-Year format with confidence level and reasoning

3. Interactive Review (optional): User can accept, edit, retry, or skip each suggestion

4. Rename: Applies suggestions (if not in dry-run mode)

Benefits of DOI Integration

• Accuracy: DOI metadata is canonical and verified
• Speed: Instant lookup vs. LLM processing time
• Cost: Free DOI lookups save on API costs for academic papers
• Reliability: Works even when PDF text extraction is poor

Cost Considerations

DOI-based Naming (Academic Papers):

• Completely free - No API costs
• No LLM needed - Direct metadata lookup
• Works for most academic papers with embedded DOIs

OpenAI (Fallback):

• Uses gpt-4o-mini by default (very cost-effective)
• Only called when DOI not found
• Processes first ~4500 characters per PDF
• Typical cost: ~$0.001-0.003 per PDF

Ollama/Local Models:

• Completely free (runs on your hardware)
• Works with any Ollama model (llama3, qwen2.5, mistral, etc.)
• Also compatible with LM Studio, vLLM, and other OpenAI-compatible endpoints

Filename Format

The tool generates filenames in this format:

• Smith-Kalman-Filtering-Applications-2020.pdf
• Adamy-Electronic-Warfare-Modeling-Techniques.pdf
• Blair-Monopulse-Processing-Unresolved-Targets.pdf

Guidelines:

• First author's last name
• 3-6 word topic description (prioritizes clarity over brevity)
• Year (if identifiable)
• Hyphens between words
• Target ~80 characters (can be longer if needed for clarity)

Architecture

This project follows Clean Architecture principles with clear separation of concerns:

src/pdf_file_renamer/
├── domain/          # Core business logic (models, ports)
├── application/     # Use cases and workflows
├── infrastructure/  # External integrations (PDF, LLM, DOI)
└── presentation/    # CLI and UI components

Key Design Patterns:

• Ports and Adapters - Clean interfaces for external dependencies
• Dependency Injection - Flexible component composition
• Single Responsibility - Each module has one clear purpose
• Type Safety - Full mypy strict mode compliance

See REFACTORING_SUMMARY.md for detailed architecture notes.

Development

Setup

# Clone repository
git clone https://github.com/nostoslabs/pdf-renamer.git
cd pdf-renamer

# Install dependencies with uv
uv sync

# Run tests
uv run pytest

# Run linting
uv run ruff check src/ tests/

# Run type checking
uv run mypy src/

Code Quality

• Tests: pytest with async support and coverage reporting
• Linting: ruff for fast, comprehensive linting
• Formatting: ruff format for consistent code style
• Type Checking: mypy in strict mode
• CI/CD: GitHub Actions for automated testing and releases

Running Locally

# Run with local changes
uv run pdf-file-renamer --dry-run /path/to/pdfs

# Run specific module
uv run python -m pdf_file_renamer.main --help

Contributing

Contributions are welcome! Please feel free to submit a Pull Request. For major changes, please open an issue first to discuss what you would like to change.

Development Workflow

1. Fork the repository
2. Create a feature branch (git checkout -b feature/amazing-feature)
3. Make your changes
4. Run tests and linting (uv run pytest && uv run ruff check src/)
5. Commit your changes (git commit -m 'Add amazing feature')
6. Push to the branch (git push origin feature/amazing-feature)
7. Open a Pull Request

Code Style

• Follow PEP 8 (enforced by ruff)
• Use type hints for all functions
• Write tests for new features
• Update documentation as needed

License

This project is licensed under the MIT License - see the LICENSE file for details.

Acknowledgments

• pdf2doi for DOI extraction
• pydantic-ai for LLM integration
• docling-parse for advanced PDF parsing
• PyMuPDF for PDF text extraction
• rich for beautiful terminal UI

Support

• Issues: GitHub Issues
• Discussions: GitHub Discussions
• Changelog: CHANGELOG.md

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Made with ❤️ by Nostos Labs