peds: basic pedigree parsing
All this does is parse pedigree files and group individuals within families. Only performs minimal validation.
Install
pip install pedsUsage
from peds import open_ped
families = open_ped(PATH)
family = families[0]
# find affected family members
affected = [ x for x in family is x.is_affected()]
# find parents
for person in family:
father = family.get_father(person)
mother = family.get_mother(person)1 maintainer
Release files for peds 1.3.2
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| peds-1.3.2-py2.py3-none-any.whl | Python 2, Python 3 | none | any | Details |
Release files / peds-1.3.2-py2.py3-none-any.whl
| Download URL | peds-1.3.2-py2.py3-none-any.whl |
|---|---|
| Size | 6.5 kB |
| Tags | Python 2 Python 3 |
|
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