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A python library for the conversion of behavioral data into genome browser compatible formats. Once behavioral data is formatted in genomic formats it is easy to use genomic software tools for its analysis. For instance you can query your data using BEDTools or visualize your records using a genome browser (see snapshot below corresponding to a rendering of mice feeding behavior on the IGV genome browser).
For more information, instructions for installation and tutorials please visit:
You can also use our web server still under development:
Mouse feeding behavior-IGV snapshot
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Release files for pergola 0.2.0
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| pergola-0.2.0.tar.gz | 52.9 kB | Without provenance | Details for pergola-0.2.0.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| pergola-0.2.0-py2.py3-none-any.whl | Python 2, Python 3 | none | any | Details for pergola-0.2.0-py2.py3-none-any.whl |
Total release size: 110.5 kB
Release files / pergola-0.2.0.tar.gz
| Download URL | pergola-0.2.0.tar.gz |
|---|---|
| Size | 52.9 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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twine/3.1.1 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.6.0 requests-toolbelt/0.8.0 tqdm/4.41.0 CPython/3.6.9
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Release files / pergola-0.2.0-py2.py3-none-any.whl
| Download URL | pergola-0.2.0-py2.py3-none-any.whl |
|---|---|
| Size | 57.6 kB |
| Tags | Python 2 Python 3 |
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SHA-256 checksum How to use checksums |
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No |
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twine/3.1.1 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.6.0 requests-toolbelt/0.8.0 tqdm/4.41.0 CPython/3.6.9
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Security for pergola 0.2.0
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