philoch-bib-enhancer 0.2.1

Scripts to enhance Philosophie.ch's Bibliography

Philosophie.ch Bibliography enhancer scripts

This repository contains scripts to enhance the bibliography of the Philosophie.ch website, by scraping different APIs and websites, and assuring the quality and consistency of the data.

Installation

# Install dependencies with Poetry
poetry install

CLI Tools

All commands should be run with poetry run or after activating the shell with poetry shell.

Command	Description	How to run
scrape-journal	Scrape journal articles by ISSN via Crossref API	poetry run scrape-journal --help
fuzzy-matcher	Fuzzy match BibItems against bibliography	poetry run fuzzy-matcher --help
raw_text_scraping_cli	LLM-based web scraping for bibliographic data	poetry run python -m philoch_bib_enhancer.cli.raw_text_scraping_cli --help
manual_raw_text_to_csv	Convert RawTextBibitem JSON to CSV	poetry run python -m philoch_bib_enhancer.cli.manual_raw_text_to_csv --help

scrape-journal

Scrape journal articles from Crossref by ISSN and year range.

poetry run scrape-journal --issn 0031-8019 --start-year 2020 --end-year 2023

Options:

• --issn, -i (required): Journal ISSN
• --start-year, -s (required): Start year
• --end-year, -e (required): End year
• --bibliography-path, -b: Path to bibliography file (.ods)
• --column-name-bibkey, -cb: Column name for bibkey
• --column-name-journal, -cj: Column name for journal
• --column-name-volume, -cv: Column name for volume
• --column-name-number, -cn: Column name for issue number

fuzzy-matcher

Match extracted BibItems against an existing bibliography using fuzzy string matching.

poetry run fuzzy-matcher \
  --input scraped_items.csv \
  --bibliography bibliography.ods \
  --output matched_results.csv

Options:

• --input, -i (required): Input file with BibItems (.csv or .ods)
• --bibliography, -b (required): Bibliography file (.ods)
• --output, -o (required): Output CSV path
• --cache-dir, -c: Cache directory (default: data/cache)
• --top-n, -n: Number of top matches (default: 5)
• --min-score, -m: Minimum score threshold (default: 0.0)
• --force-rebuild: Force rebuild of index cache
• --force-python: Use Python scorer instead of Rust

raw_text_scraping_cli

Extract bibliographic data from web pages using LLMs.

poetry run python -m philoch_bib_enhancer.cli.raw_text_scraping_cli \
  --urls https://example.com/journal/issue/1 \
  --output scraped_items.csv

Options:

• --urls, -u: URLs to scrape (space-separated)
• --urls-file, -f: File containing URLs (one per line)
• --output, -o (required): Output CSV path
• --bibliography-path, -b: Path to bibliography file (.ods)
• --column-name-*: Column name configuration (same as scrape-journal)

manual_raw_text_to_csv

Convert manually created RawTextBibitem JSON files to CSV format.

poetry run python -m philoch_bib_enhancer.cli.manual_raw_text_to_csv \
  --input raw_items.json \
  --output converted_items.csv

Options:

• --input, -i (required): Input JSON file
• --output, -o (required): Output CSV path
• --bibliography-path, -b: Path to bibliography file (.ods)
• --column-name-*: Column name configuration (same as scrape-journal)

Environment Variables

Variable	Required	Description
CROSSREF_EMAIL	Yes (for scrape-journal)	Email for Crossref API polite pool
ANTHROPIC_API_KEY	Yes (for raw_text_scraping_cli with Claude)	Anthropic API key
OPENAI_API_KEY	Yes (for raw_text_scraping_cli with OpenAI)	OpenAI API key
LLM_SERVICE	No	LLM provider: claude (default) or openai
SCRAPE_JOURNAL_OUTPUT_DIR	No	Output directory for scrape-journal (default: .)

Quick Examples

Scrape a journal and match against bibliography

# Set required env vars
export CROSSREF_EMAIL="[e-mail]"

# Scrape journal articles
poetry run scrape-journal \
  --issn 0031-8019 \
  --start-year 2020 \
  --end-year 2023 \
  --bibliography-path data/bibliography.ods

# Match results against bibliography
poetry run fuzzy-matcher \
  --input output.csv \
  --bibliography data/bibliography.ods \
  --output matched.csv

LLM-based web scraping

# Set required env vars
export ANTHROPIC_API_KEY="sk-ant-..."

# Scrape from URLs
poetry run python -m philoch_bib_enhancer.cli.raw_text_scraping_cli \
  --urls-file urls.txt \
  --output scraped.csv \
  --bibliography-path data/bibliography.ods