Skip to main content

My personal functions and utilities for Python programming.

Project description

prestools

https://img.shields.io/pypi/v/prestools.svg https://img.shields.io/travis/robertopreste/prestools.svg Documentation Status Python 3 https://img.shields.io/badge/Say%20Thanks-!-1EAEDB.svg

My personal functions and utilities for Python programming.

Features

Several ready-to-use functions for different tasks:

  • bioinformatics (prestools.bioinf)
  • data clustering (prestools.clustering)
  • plotting (prestools.graph)
  • miscellaneous (prestools.misc)

Please refer to the Usage section of the documentation for further details.

Installation

Install prestools using pip (Python 3 only):

pip install prestools

Please refer to the Installation section of the documentation for further details.

Credits

This package was created with Cookiecutter and the cc-pypackage project template.

History

0.1.0 (2019-03-07)

  • First development release.

0.1.1 (2019-03-14)

  • Add functions for clustering data.

0.1.2 (2019-03-15)

  • Add hamming_distance() and mutate_sequence() functions in prestools.bioinf and related tests;
  • Clean code style.

0.1.3 (2019-03-19)

  • Add command line interface commands and related tests for bioinf and misc modules;
  • Add filter_type() function in prestools.misc and related tests;
  • Clean code style.

0.1.4 (2019-03-23)

  • Add wordcount() function in prestools.misc and related tests.

0.1.5 (2019-04-05)

  • Add equal_files() function in prestools.misc and related tests;
  • Update docstrings.

0.1.6 (2019-04-11)

  • Add random_image() function and CLI in prestools.plotting.

0.1.7 (2019-04-20)

  • Add benchmark() function in prestools.misc and related tests.

0.1.8 (2019-04-26)

  • Change pm.benchmark() function to a decorator;
  • Add several distance calculation functions to prestools.bioinf and related tests;
  • Reformat code in prestools.bioinf.

0.1.9 (2019-04-27)

  • Add distance functions to bioinf CLI command and related tests.

0.1.10 (2019-05-06)

  • Change plotting library name to graph (to avoid alias conflict with pandas_profiling).

0.1.11 (2019-05-07)

  • Fix docstrings and type hints;
  • Update documentation.

0.1.12 (2019-05-08)

  • Add apply_parallel function to prestools.misc.

0.1.13 (2019-06-22)

  • Add short version arguments to reverse_complement bioinf function.

0.1.14 (2019-07-03)

  • Add learn module and related tests;
  • Remove random_image from graph module;
  • Clean code.

0.2.0 (2019-08-14)

  • Add rpkm and quantile_norm functions to prestools.bioinf;
  • Add reduce_xaxis_ticks and reduce_yaxis_ticks functions to prestools.graph;
  • Move flatten_image to prestools.graph;
  • Remove prestools.learn;
  • Update related tests;
  • Fix documentation and API.

0.2.1 (2019-09-07)

  • Add plot_confusion_matrix to prestools.graph;
  • Add related tests;
  • Drop support for Python < 3.6;
  • Update requirements;
  • Update documentation.

Project details


Release history Release notifications

This version

0.2.1

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for prestools, version 0.2.1
Filename, size File type Python version Upload date Hashes
Filename, size prestools-0.2.1-py2.py3-none-any.whl (18.7 kB) File type Wheel Python version py2.py3 Upload date Hashes View hashes
Filename, size prestools-0.2.1.tar.gz (30.6 kB) File type Source Python version None Upload date Hashes View hashes

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page