previsedx-quantstudio-file-utils 0.1.3

Usage

import os
from previsedx_quantstudio_file_utils import QuantStudioXlsxParser as Parser
from previsedx_quantstudio_file_utils import constants
import yaml
from pathlib import Path

config_file = "conf/config.yaml"
if not os.path.exists(config_file):
    config_file = constants.DEFAULT_CONFIG_FILE
config = yaml.safe_load(Path(config_file).read_text())

parser = Parser(
    config=config,
    config_file=config_file,
    logfile=logfile,
    outdir=outdir,
    outfile=outfile,
    verbose=constants.verbose,
)

infile = "quantstudio.xls"
records = parser.get_records(infile)
for record in records:
    print(f"Quantity mean is '{record.quantitymean}' for sample '{record.samplename}'")