A toolkit for PRM (Parallel Reaction Monitoring) data analysis

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Project description

prmtools

A toolkit for PRM (Parallel Reaction Monitoring) data analysis in Python.

Features

  • Fragment extraction
  • Peak quality assessment
  • EIC and MS2 plotting
  • Results consolidation
  • Command-line interface

Installation

pip install .

Usage

prmtools --input <input_file_or_dir> --output <output_dir>

Structure

  • prmtools/ - Core package modules
  • prmtools/cli.py - Command-line interface
  • setup.py - Packaging script

Requirements

  • numpy
  • pandas
  • matplotlib
  • scipy
  • openpyxl

License

MIT

Project details

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This version

0.1.0

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