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Common utilities for parsing and handling peptide-spectrum matches and search engine results.

Project description

Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python.

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About

TODO

Installation

Install with pip:

pip install psm-utils

Quickstart

TODO

Development

Local install

For development, install with pip in editable mode:

pip install --editable .[dev]

Or with Flit:

flit install --symlink

Unit tests

Run tests with pytest:

pytest ./tests

Documentation

To work on the documentation and get a live preview, install the requirements and run sphinx-autobuild:

pip install .[doc]
sphinx-autobuild  --watch ./psm_utils ./docs/source/ ./docs/_build/html/

Project details


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