Ptychodus is a ptychography data pipeline application.
Project description
Ptychodus is a ptychography data analysis application that extracts, loads, and transforms instrument data for processing. It integrates several reconstruction libraries for phase retrieval. Ptychodus can be used interactively or integrated into beamline data pipelines.
Standard Installation
To install ptychodus from PyPI with the most common optional dependencies:
$ python -m pip install ptychodus[globus,gui,ptychi]Instructions for installing in containers and from conda-forge are provided in the docs directory.
Developer Installation
For a developer installation:
$ git clone https://github.com/AdvancedPhotonSource/ptychodus.git
$ conda create -n ptychodus --file ptychodus/requirements-dev.txt
$ conda activate ptychodus
$ pip install -e ./ptychodusTo install pty-chi
$ pip install ptychiTo install PtychoNN
$ conda install -n ptychodus ptychonnLaunch ptychodus:
$ conda activate ptychodus
$ ptychodusReporting Bugs
Open a bug at https://github.com/AdvancedPhotonSource/ptychodus/issues.
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