pubmedtool 0.1.3

A tool to get papers list from pubmed

PubMed Tool

This tool fetches research papers from PubMed based on a search query, extracts non-academic authors, and saves the results to a CSV file.

Features

• Fetch paper IDs from PubMed using a search query.
• Retrieve detailed information about the papers.
• Extract non-academic authors from the papers.
• Save the results to a CSV file.

Requirements

• Python 3.x
• requests library
• argparse library
• xml.etree.ElementTree library
• re library
• logging library
• csv library
• poetry for dependency management

Usage

First, install the dependencies using Poetry:

poetry install

Then, run the tool with the desired search query:

poetry run python get-papers-list --query "your search query"