A set of computational tools written in python for the analysis of viral capsids
A python package for identification of dominant motions and rigid domains of protein shells using Elastic Network Models.
The package requires python < 3.11, we reccomend python 3.10. Via pip:
pip install pyCapsid
conda install -c colintravisbrown -c conda-forge pycapsid
Documentation is provided on our github pages site: https://luquelab.github.io/pyCapsid/
An example notebook is provided in the notebooks folder. An accompanying tutorial is provided in the documentation.
The Github Repository of this project: https://github.com/luquelab/pyCapsid
This is an evolving repository Started: 2022-10-24
FILES & FOLDERS
FOLDER: /bin --> This folder contains basic scripts and executable files.
FOLDER: /data --> This folder contains the raw data associated with the project and the potential references.
FOLDER: /docs --> This folder contains the manuscript, digital copies of the cited references, figures, and other associated files for publication.
FOLDER: /results --> This folder contains the results, performance analysis, and commented references associated with the project.
FOLDER: /src --> This folder contains source code of the package.
The syntax of markdown files (.md) is CommonMark unless specified otherwise (https://commonmark.org/help/)
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