Skip to main content

Python ECG toolkit for common ECG dataset format I/O

Project description

pyECG is an opensource Python package which supports read/write of common ECG dataset formats. Current supported formats are:

  1. Physiobank WFDB (.hea/.dat)
  2. iShine-formatted Holter ECG files (.ecg/.ann)

Getting Started

These instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See deployment for notes on how to deploy the project on a live system.

Prerequisites

To setup pyECG, you need:

  1. Python 3.6
  2. ishneholterlib ==2017.4.11
  3. numpy==1.16.2
  4. wfdb==2.2.1

Installing

pip install pyECG

Basic Usage

from pyecg import ECGRecord

# To load a wfdb formatted ECG record
hea_path = "/path/to/your/hea/file"
record = ECGRecord.from_wfdb(hea_path)

# To load a ishine formatted ECG record
hea_path = "/path/to/your/ecg/file"
record = ECGRecord.from_ishine(hea_path)

time = record.time
signal = record.get_lead(lead_name)
print(signal.lead_name)

License

Copyright 2019 Michael Tao-Yi Lee

Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the “Software”), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for pyECG, version 0.0.9.1
Filename, size File type Python version Upload date Hashes
Filename, size pyECG-0.0.9.1-py2.py3-none-any.whl (14.9 kB) File type Wheel Python version py2.py3 Upload date Hashes View
Filename, size pyECG-0.0.9.1.tar.gz (7.7 MB) File type Source Python version None Upload date Hashes View

Supported by

Pingdom Pingdom Monitoring Google Google Object Storage and Download Analytics Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page