pyafv

Python implementation of the active-finite-Voronoi (AFV) model

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Project description

Python code that implements the active-finite-Voronoi (AFV) model. The AFV framework was introduced and developed in, for example, Refs. [1–3].

More information

GitHub: https://github.com/wwang721/pyafv

See important issues for additional context, such as:

QhullError when 3+ points are collinear #1 [Closed - see comments]
Add customized plotting to examples illustrating access to vertices and edges #5 [Completed in PR #7]
Time step dependence of intercellular adhesion in simulations #8 [Closed in PR #9]

References

[1]	J. Huang, H. Levine, and D. Bi, Bridging the gap between collective motility and epithelial-mesenchymal transitions through the active finite Voronoi model, Soft Matter 19, 9389 (2023).
[2]	E. Teomy, D. A. Kessler, and H. Levine, Confluent and nonconfluent phases in a model of cell tissue, Phys. Rev. E 98, 042418 (2018).
[3]	W. Wang (汪巍) and B. A. Camley, Divergence of detachment forces in the finite-Voronoi model, manuscript in preparation (2026).

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wwang721

Release history Release notifications | RSS feed

0.4.11

May 13, 2026

0.4.10

Apr 22, 2026

0.4.9

Apr 20, 2026

0.4.8

Apr 7, 2026

0.4.7

Mar 16, 2026

0.4.6

Feb 16, 2026

0.4.5

Feb 6, 2026

0.4.3

Jan 25, 2026

0.4.2

Jan 24, 2026

0.4.0

Jan 18, 2026

0.3.9

Jan 15, 2026

0.3.6

Jan 10, 2026

0.3.5

Jan 9, 2026

0.3.2

Jan 5, 2026

This version

0.3.1

Jan 4, 2026

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