Distance-based colocalisation analysis module
Project description
PyBioProx: 2 & 3d spatial distance analysis in Python
This module, pybioprox
, offers efficient 2d and 3d spatial analysis of colocalisation.
The analyses fall into the category of object-based colocalisation methods.
Installation
To install this Python module, you may use pip as follows:
pip install pybioprox
If you wish to also install the optional Graphical User Interface script, this may be done
by specifying the gui
optional extra:
pip install pybioprox[gui]
Getting started
Once installed, the module can be invoked from the command-line using:
python -m pybioprox <path_to_folder>
to run the analysis in batch mode on all data files at the location path_to_folder
.
If you have installed the gui component or already have the required gui libraries, present on your system, then you may also run
pybioprox_gui
directly from the command line.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for pybioprox-1.0.2-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | ccbef2b3e78523efbd744a30a934807b35c82e12a202587593db142be2053a5d |
|
MD5 | 4cbe8a37fc32740af176065488b3153b |
|
BLAKE2b-256 | cfcaec3c4ca6f2a296a6dcdbf73919e000b532204b357f3df72c52830370632d |