CircleMedianFilter (CMF) — Fast median filtering for phase or orientation data
A fast median filter for signals and images whose values lie on the unit circle (phase, orientation, interferometric SAR, wind directions, optical-flow angles). Linear in filter mask size for non-quantised data, constant for quantised data.
Left: A circle-valued image — every pixel takes its value on the unit circle (or in angular representation a value in (-π, π]), visualised as the hue component in the HSV colour space. Right: Effect of the circle-median filter using a 7 × 7 mask.
The (arc distance) median filter for an image y with values on the unit circle is given by
where d denotes the arc distance length of two angles, and r, t are the horizontal and vertical "radii" of the filter mask.
Paper
M. Storath, A. Weinmann. Fast median filtering for phase or orientation data. IEEE Transactions on Pattern Analysis and Machine Intelligence, 40(3):639–652, 2018. preprint
Quickstart
Python
pip install pycirclemedianfilter
Input arrays are accepted in either C-order or Fortran-order (since v0.1.7 the binding auto-converts as needed). Outputs are Fortran-strided. See demos_python/ for examples.
MATLAB
- Run
CMF_install.min the MATLAB console and follow the demos indemos_matlab/.
C++
- Compile
CMF_library.cpp. The relevant functions aremedfiltCirc2DandmedfiltCirc2DQuant. Their usage is documented as comments inCMF_library.cpp.
Runtime comparison
Time complexity with respect to filter mask size is
- linear for non-quantised data,
- constant for quantised data.
Applications
-
Smoothing of phase data, e.g. interferometric SAR images
-
Smoothing of orientation data, e.g. wind directions
-
Smoothing of vector fields in polar coordinates, e.g. optical-flow images.
Updates
- 2025/02/18: Added Python bindings for the core C++ filtering code.
Contents
demos_matlab/— MATLAB demosdemos_python/— Python demosauxiliary/— helper functions (MATLAB)filters/— the fast algorithms for median filtering of circle-valued data (C++ with MATLAB wrappers)
How to cite
If you use this software, please cite the paper above. GitHub's "Cite this repository" button on the repo page reads the version and date-released fields from CITATION.cff and renders BibTeX/APA.
Selected user applications
- S. Quan et al. Derivation of the orientation parameters in built-up areas: with application to model-based decomposition. IEEE Transactions on Geoscience and Remote Sensing, 2018.
- H. Salmane et al. A method for the automated detection of solar radio bursts in dynamic spectra. J. Space Weather Space Clim. 2018.
- B. Guo, J. Wen, Y. Han. Deep material recognition in light-fields via disentanglement of spatial and angular information. ECCV 2020.
See also
Sibling projects from the same research program on variational methods for signal and image processing:
- Pottslab — multilabel image segmentation via the Potts / piecewise-constant Mumford-Shah model
- L1TV — exact L1-TV regularisation of real- or circle-valued signals
- CSSD — cubic smoothing splines for signals with discontinuities
- MumfordShah2D — edge-preserving image restoration via the Mumford-Shah model
- DCEBE — bolus arrival time estimation for DCE-MRI signals
License
Released under the MIT License. See LICENSE.
Release files for pycirclemedianfilter 1.0.0
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