This Tools is Design for NGS Circos Plot with using Python.
Project description
# Python Modules for Circos Plot
[![Build Status](https://travis-ci.com/KimBioInfoStudio/PyCircos.svg?branch=develop)](https://travis-ci.com/KimBioInfoStudio/PyCircos) ![codecov](https://codecov.io/gh/KimBioInfoStudio/PyCircos/branch/develop/graph/badge.svg)
## 1. Pre Installation
> As official, Pyhton2 will end life form 2020-1-1, So we develop a new version support Python3.5+, We deeply recommand all users using the python version 3.5+, Thx!
### Python 3.5+ packages(automatically installed)
numpy
pandas
matplotlib
## 2. Installation ### intall dev branch
install from source code
` git clone https://github.com/KimBioInfoStudio/PyCircos.git cd PyCircos pip install -r requirements.txt python3 setup.py install [--user] `
or install form source code with using ‘make’
` git clone https://github.com/KimBioInfoStudio/PyCircos.git cd PyCircos make install `
install release branch
` pip install pycircos `
## 3. Examples ### command
` cd ./test/ python3 test.py open ./demo.png ` ### results
![](./test/demo.png)
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