pycistem
Python scripts inteacting with the cisTEM package
Usage
import asyncio
from pycistem.programs.refine\_template import RefineTemplateParameters, run
params = RefineTemplateParameters(input\_file="test.mrc",template="ribo.mrc")
results = asyncio.run(run(params))
from pycistem.core import *
import matplotlib.pyplot as plt
im = Image()
spectrum = Image()
im.QuickAndDirtyReadSlice("test.mrc",1)
spectrum.AllocateSameAs(im)
im.ForwardFFT(True)
im.AmplitudeSpectrumFull2D(spectrum)
plt.imshow(spectrum)
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