pycognaize 1.4.44

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Cognaize SDK

Welcome to Cognaize SDK. Cognaize SDK provides tools and functionalities for creating, evaluating and deploying models into Cognaize platform.

• Website
• Documentation

Cognaize SDK provides:

• Working with Cognaize snapshots
• Working with OCR data
• Working with PDF files
• Working with images

Installation

Cognaize SDK can be installed using pip:

pip install pycognaize

Have a look at the quick tutorial for understanding main concepts of the SDK.

Changelog

[1.4]

[1.4.44] - 2024-04-05

• Add attribute mapping in Field object

[1.4.43] - 2024-04-03

• Add requirement cloudpathlib[s3,azure,gs]~=0.16.0

[1.4.42] - 2024-04-02

• Improve cloudpathlib integration to support Azure and Google Cloud

[1.4.41] - 2024-03-25

• Improve Snapshot.download
  • Download snapshot without login required

[1.4.40] - 2024-03-6

• Improve Document.fetch_document
  • Add option to provide token and api url as parameters
  • Raise if env variables are missing
  • Raise if response is invalid
  • Handle trailing forward slashes in url
• Fix Page.draw

[1.4.39] - 2024-02-27

• Handle tables in Document.get_layout_text

[1.4.38] - 2024-02-25

• Add Document.get_layout_text method

[1.4.37] - 2024-02-23

• Add Genie for easy model testing

[1.4.36] - 2024-02-21

• Handle pandas warnings and 1.2.0 compatibility issues.
• Handle M series Mac incompatibility issues.
• Warn for missing page image/ocr information.
• Add pyarrow as a requirement

[1.4.35] - 2024-02-21

• Optimize pycognaize.common.utils.img_to_black_and_white
• Test coverage 85%

[1.4.34] - 2024-01-23

• Fix create_lines function in Page class
• Update docs/requirements.txt
• Update python_versions.svg

[1.4.33] - 2024-01-16

• Remove support for python 3.8 and lower. Add support for 3.10, 3.11 and 3.12
• Use map instead of applymap in DataFrame objects

[1.4.32] - 2024-01-10

• Fix load_page_ocr and load_page_images

[1.4.31] - 2023-12-04

• Add classes property to fields

[1.4.30] - 2023-11-30

• Remove cloudstorageio from the SDK

[1.4.29] - 2023-11-06

• Changes os.path.join for s3 paths

[1.4.28] - 2023-10-25

• Add support for scale output

[1.4.27] - 2023-09-27

• Add support for s3 path resolution in Windows

[1.4.26] - 2023-09-25k

• Add exclude_html to snapshot download
• Add include option to snapshot downloader

[1.4.25] - 2023-09-13

• Add unit test for span_field.py

[1.4.24] - 2023-09-13

• Create snapshot downloader class

[1.4.23] - 2023-08-17

• Add tests for exclude options
• Add tests for cloudstorageio hooks usage
• Update to cloudstorageio version 1.2.14

[1.4.22] - 2023-08-16

• Add new method for document fetching

[1.4.21rc1] - 2023-08-08

• Use new method from cloudstorageio for big snapshot download

[1.4.20] - 2023-07-30

• Add replacing text-span datatype with text_span in from_dict input_fields of Document object

[1.4.19] - 2023-07-30

• Update _to_dict and construct_from_raw functions in SpanField class to set value when field does not have tag

[1.4.18] - 2023-07-28

• Update _line_values attribute in SpanField class in order to return sentences per lines

[1.4.17] - 2023-07-19

• Update __add__ function in ExtractionTag class in order to include the text between the two BoxTag objects selected

[1.4.16] - 2023-07-14

• Add scale property to NumericField class

[1.4.15] - 2023-07-12

• NumericField.value will return the calculated value if no field or tag values are available

[1.4.14] - 2023-07-11

• Add exclude options for Snapshot download

[1.4.13] - 2023-07-10

• Add calculated values to NumericField

[1.4.12] - 2023-06-30

• Add missing function to CloudService

[1.4.11] - 2023-06-28

• Ignore empty table tags in langchain_loader.py

[1.4.10] - 2023-06-28

• Separate LangchainLoader text blocks with new lines

[1.4.10] - 2023-07-13

• Add to_text() functionality to Document class that utilizes inputs from PageLayout model to create the text version of the document

[1.4.9] - 2023-06-27

• Add to_string() functionality to table_tags
• Add langchain_loader util to convert Pycognaize Document objects to Langchain Document objects

[1.4.8] - 2023-06-24

• Add field value and tag value to numeric field

[1.4.7] - 2023-06-15

• Add ocr_tags() and line_tags() to Page

[1.4.6] - 2023-06-27

• Add replace_nans_with_empty_html_tags functionality in HTMLTableTag build df

[1.4.5] - 2023-06-12

• Add re-login when AWS token is expired

[1.4.4] - 2023-05-31

• Add anytree to setup-requires in setup.cfg

[1.4.3] - 2023-05-31

• Fix handling of section field with no tags

[1.4.2] - 2023-05-30

• Fix handling of section field value when field does not have tags

[1.4.1] - 2023-05-29

• Add section field and section tag functionality

[1.4.0] - 2023-05-25

• Add classification labels functionality to Field objects

[1.3]

[1.3.14] - 2023-05-10

• Add LinkField object
• Add returning group name in to_dict functionality of Field object

[1.3.13] - 2023-05-01

• Add exclude folders option for lisdir in html_info
• Update version cloudstorageio >= 1.2.8

[1.3.12] - 2023-05-01

• Rename HTMLTag to HTMLTagABC
• Rename TDTag to HTMLTag
• Handle out of table tags in XBRL

[1.3.11] - 2023-04-28

• Add interface to create directory summary hashes
• Add automatic snapshot hash creation for snapshot.download

[1.3.10] - 2023-03-31

• Add login command and code for submit to model registry

[1.3.9] - 2023-03-30

• Refactor HTML._validate_path() to include try-except block

[1.3.8] - 2023-03-28

• Improve html file path validation by adding a new check in HTML._validate_path()

[1.3.7] - 2023-03-24

• Match (xbrl) using xpath and indices in matches function of model.py

[1.3.6] - 2023-03-19

• Add functionality to run Model().execute_eval given the ground truth document id

[1.3.5] - 2023-03-11

• Make Confidence key lowercase.

[1.3.4] - 2023-03-09

• Rename classConfidence key to Confidence in enums.

[1.3.3] - 2023-03-07

• Check that the sum of confidence values is close to 1 instead of exactly 1.

[1.3.2] - 2023-02-21

• Add is_xbrl attribute in document, to identify if document is XBRL or not
• Modify assign indices functionality to handle XBRL tables
• Modify Model.matches() to also match with HTMLTags
• Add HTML._validate_path() to get valid path of source.html file
• Fix reading html file from S3
• Add tag_id attribute to HTMLTag

[1.3.1] - 2023-02-14

• Update install requirements in setup.cfg
• Rename environment variable COGNAIZE_HOST to API_HOST
• Raise error when trying to log in without API_HOST environment variable
• Add documentation and make cosmetic changes in login.py

[1.3.0] - 2023-02-10

• Add XBRL support
• Add spacy to model-requirements.txt
• Add bs4 to requirements.txt

[1.2]

[1.2.9] - 2023-01-17

• Add class confidence functionality to tag objects

[1.2.8] - 2023-01-09

• Update Numeric parser to handle float numbers with three or more decimal numbers
• Add "-" character handler in numeric parser
• Change all occurrences of 'cognaize' to 'Cognaize'

[1.2.7] - 2022-12-22

• Change PyMuPDF version to support M1

[1.2.6] - 2022-12-06

• Update numeric parser to better handle decimal numbers

[1.2.5] - 2022-11-28

• Read page image height/width from document.json
• Field raw value bug fix

[1.2.4] - 2022-11-28

• Field object raw_value bug fix

[1.2.3] - 2022-11-16

• Field object raw_value bug fix

[1.2.3] - 2022-11-16

• Field object raw_value contains fields value

[1.2.2] - 2022-11-11

• Add HTTP request timeout for genie model run

[1.2.1] - 2022-11-08

• Add functionality for grouping fields by key

[1.2.0] - 2022-10-11

• Modify assign indices functionality to correctly index tables located side by side

[1.1]

[1.1.4] - 2022-10-06

• Add snapshot download to specified directory functionality
• Add Page Section tag and field functionalities

[1.1.3] - 2022-10-05

• Add login functionality to pycognaize

[1.1.2] - 2022-09-12

• group_by_field returns list of fields with group_key
• Add minor improvement for NumericParser
• Tied fields now only return unique fields

[1.1.1] - 2022-09-05

• Fix field grouping with non-existing key
• Add field grouping with given Field object

[1.1.0] - 2022-08-25

• Added multiprocessing download of images and ocr data

[1.0]

[1.0.3] - 2022-08-23

• Change get_tied_fields, get_tied_tags, get_first_tied_field, get_first_tied_tag methods to return also python names
• Fix get_first_tied_field_value and get_first_tied_tag_value methods to work properly after changes

[1.0.2] - 2022-08-23

• Fix get_tied_tags method

[1.0.1] - 2022-08-22

• Fix get_tied_fields method

[1.0.0] - 2022-08-15

• Update signature of base Field class
• Update constructor of SpanField class

[0.3]

[0.3.66] - 2022-08-15

• Add tied_field and tied_tag functionality to document

[0.3.65] - 2022-08-10

• Enhance numeric parser to handle strings like 0.01, add unittest

[0.3.64] - 2022-08-09

• Add span field and span tag

[0.3.63] - 2022-08-04

• Add grouping functionality for input and output fields of document

[0.3.62] - 2022-07-20

• Update GitHub workflow to publish documentation on release

[0.3.61] - 2022-07-13

• Read image width and height from document.json instead of loading actual images for that

[0.3.60] - 2022-07-03

• Fix seaborn issue

[0.3.59] - 2022-07-03

• Remove opencv and seaborn from setup.cfg requirements

[0.3.58] - 2022-06-20

• Deprecation decorator chooses version automatically

[0.3.57] - 2022-06-20

• Fix _post_response_eval() method of Model

[0.3.56] - 2022-06-20

• Remove OpenCV from main requirements (now in model-requirements)
• Add deprecation and module not found warning decorators
• Get rid of opencv dependencies
• Update GitHub workflow to use model-requirements

[0.3.55] - 2022-06-18

• Set logging level to debug for missing OCR or image files

[0.3.54] - 2022-06-18

• Added for running workflows

[0.3.53] - 2022-06-18

• Exclude tests from the package distro
• Include white pixel in the distro
• Remove MANIFEST.in
• Add virtualenv to dev-requirements.txt
• Publish in main pypi repository when running setup.sh

[0.3.52] - 2022-06-15

• Integrate evaluation driver

[0.3.51] - 2022-06-11

• Fix get_matching_table_cells_for_tag

[0.3.50] - 2022-06-10

• Update documentation (logo, badges, etc.))

[0.3.49] - 2022-06-06

• Add names to GitHub actions

[0.3.48] - 2022-06-06

• Remove redundant information from README.md

[0.3.47] - 2022-06-06

• Update setup.sh to create wheel and upload to pypi
• Setup.sh performs doctests as part of the build process

[0.3.46] - 2022-06-03

• Added tutorial about working with tags, and PDF
• Made updates to documentation

[0.3.45] - 2022-06-03

• Obfuscate data in pycognaize tests
• Update names in GitHub actions

[0.3.44] - 2022-05-31

• Create tutorial about leveraging tables in cognaize SDK
• Add logo and favicon to documentation
• Add supported python version badge to readme
• Add logo to readme

[0.3.43] - 2022-05-28

• Remove outdated modules (ocr.py and recipe.py)
• Remove Dockerfile and outdated build scripts
• Add dev-requirements.txt, update badges

[0.3.42] - 2022-05-27

• Add badge generating script to show in Readme
• Update Readme to show badge, documentation and tutorials
• Add sphinx doctests to GitHub actions

[0.3.41] - 2022-05-25

• Updated homepage of the documentation
• Added versioning to RTD. (NOT FINAL. CHECKS VERSIONS FROM GIT WHICH…)
• Added blank tutorial pages
• Updated sidebar toc tree structure
• Added doctests to quick tutorial
• dded sphinx.ext.doctest
• Updated create_docs to include new _autosummary directory and create doctest

[0.3.40] - 2022-05-20

• Fix styling and refactor in order to pass flake8 checks

[0.3.39] - 2022-05-20

• Add backquotes in changelog
• Group changelog entries
• Changelog ordered from the latest version to first
• Add script to deploy the docs
• Add quick_tutorial.rst file
• Update index.rst to include links to general sections
• Add myst-parser to docs requirements.txt
• Change Markdown parser to myst-parser
• Add quickstart.rst
• Add reading .md files for changelog
• Separate installation.rst

[0.3.38] - 2022-05-19

• Configure sphinx for generating proper API reference
• Create general docs outline, add generated autosummary rst files in ignore files

[0.3.37] - 2022-05-16

• Added docstrings and type hints to modules

[0.3.36] - 2022-05-16

• Rename the package to pycognaize

[0.3.35] - 2022-05-13

• Added GitHub workflows for linting and testing
• Changed docstrings in snapshot.py and lazy_dict.py

[0.3.34] - 2022-05-12

• Fix all tests

[0.3.33] - 2022-05-11

• Fix requirements and setup.sh

[0.3.32] - 2022-04-11

• Add opencv-python-headless==4.0.1.23 in requirements for avoiding ImportError: cannot import name '_registerMatType' (only for usage in table_detection)

[0.3.31] - 2022-04-11

• Bring back using opencv in bytes_to_array, string_to_array, img_to_black_and_white for stick_word_boxes functionality (only for usage in table_detection)

[0.3.30] - 2022-04-11

• Change TableTag to take cell data, not use table dividers
• Add tests corresponding to changed TableTag

[0.3.29.a0] - 2022-04-06

• Fix in get_table_title to give not first 8 rows of page while 8 rows above table

[0.3.29] - 2022-04-06

• Add numeric parser in common

[0.3.28] - 2022-03-04

• Remove opencv from requirements, add some utils

[0.3.27] - 2022-02-10

• Set requirement pymupdf<=1.19.4 in setup.cfg

[0.3.26] - 2022-02-04

• Fix pymupdf conflicting version issue(1.19.4)

[0.3.25] - 2021-11-13

• Add raw_value to TextField

[0.3.24] - 2021-11-13

• call build_df in TableTag.__init__ to skip corrupted table tags

[0.3.23] - 2021-11-13

• call TableTag._build_df in init so that corrupt table tags are not created on snapshot read

[0.3.22] - 2021-11-13

• Implement TableTag.__getitem__
• Define TableTag.raw_df
• Cache property TableTag.df on access
• Do not build_df in TableTag.__init__

[0.3.21] - 2021-11-12

• Fix Document.get_table_cell_overlap (look both in input and output fields, fix the iou page check issue)

[0.3.20] - 2021-11-10

• Add Document.metadata attribute

[0.3.19] - 2021-11-10

• Remove assertion tests for fields and tags where applicable
• Set all warnings to debug level in tag.py
• Do not fail on invalid tag json data, but skip the tag (all logs are on debug level)

[0.3.18] - 2021-11-02

• Enforce utf-8 encoding when reading document.json locally

[0.3.17] - 2021-10-29

• Add Document.to_pdf() feature
• Add annotate_pdf() function in document.py
• Add Unittests for Document.to_pdf()
• Fix requirement (fitz to pymupdf)

[0.3.16] - 2021-10-22

• Make evaluate method of Model class abstract

[0.3.15] - 2021-10-21

• Add handling repeating field and group cases in evaluate functionality of model

[0.3.14] - 2021-10-20

• Rename Model.predict_based_on abstract method to Model.copy method
• Remove predict_based_on method from test_model ExampleModel class

[0.3.13] - 2021-10-12

• Add Model.execute_based_on_match, Model.predict_based_on, and Model._post_response methods
• Add separate Index._store method
• Add response_to_dict method to index class for transformation of the response to needed format - {doc_id: encoding}
• Update execute_based_on_match method in model class to get document object for matched base document"
• Remove INDEX from Model
• Change Index to create fields for matched document ID and confidence

[0.3.12] - 2021-10-11

• Remove ssl verification from GET/POST requests

[0.3.11] - 2021-10-04

• Add tests for pycognaize.common.utils.intersects

[0.3.10] - 2021-10-03

• Fix pycognaize.common.utils.intersects

[0.3.9a24] - 2021-09-06

• Fixed the issue of local running the tests

[0.3.9a23] - 2021-09-01

• LаzyDict.__getitem__ returns None, if reading the document fails
• Define the return value type

[0.3.9a22] - 2021-08-31

• Add Index class for document-index abstraction
• Add unittests for Index (93% coverage)

[0.3.9a21] - 2021-08-31

• add return_tags functionality in get_ocr_formatted, _create_lines, search_text, extract_area_words of Page
• add image_bytes property
• remove assigning results of get_image() ang get_ocr() to hidden attributes

[0.3.9a20] - 2021-08-26

• Added test for execute_genie_v2

[0.3.9a19] - 2021-08-24

• sorted self._ids for lazy_dict.py in line 18

[0.3.9a18] - 2021-08-24

• Added test_lazy_dict.py

[0.3.9a17] - 2021-08-24

• Added tests for document.ocr.py.

[0.3.9a16] - 2021-08-20

• Added missing tests for table_tag.

[0.3.9a15] - 2021-08-20

• Added tests for draw. Corrected an issue in page.py.

[0.3.9a14] - 2021-08-20

• Corrected the issue in test_utils.py. Changed the writen code that relies on the ordering of os.listdir.

[0.3.9a13] - 2021-08-20

• Add tests for Page (90% coverage)

[0.3.9a12] - 2021-08-20

• Correct tag Euclidean distance method by changing the private variables into public

[0.3.9a11] - 2021-08-18

• Added missing test methods for Tag, utils, Cell, AreaField, Document, and Field (89% coverage).

[0.3.9a10] - 2021-08-16

• Fix tag Euclidean distance method

[0.3.9a9] - 2021-08-13

• Added area argument to page.search_text() to specify scope

[0.3.9a8] - 2021-08-13

• Add image_arr, image_height, image_width, ocr_raw properties

[0.3.9a7] - 2021-08-11

• Added getter and setter for field group_key

[0.3.9a6] - 2021-08-10

• Add an option for image size in page.draw() and set a larger size as default
• Add OS specific behavior for preview_img
• Remove unnecessary exceptions

[0.3.9a5] - 2021-08-10

• Add tag euclidean distance method

[0.3.9a4] - 2021-08-09

• Add evaluation and unittests including content only metrics
• Add ConfusionMatrix and heatmap drawing function

[0.3.9a3] - 2021-08-08

• Add EnvConfigEnum.SNAPSHOT_ID
• get snapshot_path using snapshot_id
• refactor LOCAL_SNAPSHOT_PATH to SNAPSHOT_PATH
• Update snapshot.py tests

[0.3.9a2] - 2021-08-08

• page.search_text() did not find certain substrings present in page.free_form_text(). Found two reasons for this behavior.
  • The list of ocr-data passed to find_frirst_word_coord was page.ocr('words'), which has the entries sorted by word_id. This makes the sort flag of the function obsolete, and second it leads to cases in which the coordinates of sub-strings from page.free_form_text() cannot be found using the function the order of the words in page.free_form_text() is unrelated to word_id. For example a sub-string of page.free_form_text() might be “brown fox” with the word_id of “brown” being equal to 3 and “fox” being equal to 8. In this case find_first_word_coords would not find the coordinates, as it would break the for-loop as the word with word_id 4 is not “fox”. This behavior was fixed by passing the ocr data in the same order as in page.free_form_text(), still giving the option to sort it by word_id using the sort-flag.
  • Inside the find_first_word_coord function the words of the sub-string were always put through a cleanup regex before being compared to the ocr_text (which was not cleaned up if the clean-flag was set to false). This leads to cases in which a sub-string such as “Phone: 12345” would not be found as “Phone:” would be cleaned up to “Phone”. This was fixed by either putting the words of the sub-string as well as the values for ocr_text through a cleanup regex or neither of them, depending on the clean-flag.

[0.3.9a1] - 2021-08-06

• Implement and/or update all tests for 0.3.7 versions (ALL TESTS PASS)
• Optimize imports

[0.3.8a5] - 2021-08-03 (0.3.8 versions do not include the changes in 0.3.7 versions)

• Fix page.search_text()

[0.3.8a4] - 2021-07-18 (0.3.8 versions do not include the changes in 0.3.7 versions)

• Add Model.evaluate
• Fix changelog wrong years (Incorrect 2020 years changed to 2021)

[0.3.8a3] - 2021-06-24 (0.3.8 versions do not include the changes in 0.3.7 versions)

• Fix table divider offsets and interruption coordinates (FIXES THE BUG FROM 0.3.8a2)

[0.3.8a2] - 2021-06-24 (0.3.8 versions do not include the changes in 0.3.7 versions)

• Fix table divider offsets and interruption coordinates (BUGGED VERSION)

[0.3.8a1] - 2021-05-23 (0.3.8 versions do not include the changes in 0.3.7 versions)

• Fix Tag.intersects method

[0.3.7a9] - 2021-07-07

• AreaField will raise a warning if the input value field is not a string and set it to empty string (if the field has no tags)

[0.3.7a8] - 2021-05-30

• Fix AreaField.value

[0.3.7a7] - 2021-05-26

• Fix get item in lazy_dict (required path)

[0.3.7a6] - 2021-05-23

• Fix Tag.intersects method

[0.3.7a5] - 2021-05-13

• Fix NaN issue in execute_genie_v2 post request json

[0.3.7a4] - 2021-05-10

• Fix table cell value population issue

[0.3.7a3] - 2021-05-09

• If page image or ocr files cannot be found, use an empty ocr/ 1 white pixel image instead

[0.3.7a2] - 2021-05-08

• Add execute_genie_v2 for executing genie with airflow

[0.3.7a1] - 2021-05-08

• Page object uses absolute path and allows lazy-loading from cloud (all tests pass)
• Adjust all filename conventions to work with original image/ocr storage name conventions

[0.3.6] - 2021-03-29

• Adjust tests to count for the Range margin (all tests pass)

[0.3.6a4] - 2021-03-05

• Modify the margin in Range.to_dict, set margin to 0.15

[0.3.6a3] - 2021-03-05

• Add margin to table cells in TableTag._build_cell
• Fix ordering information in digester
• Fix typing annotation for OrderedDict output
• Change document.x and document.y into OrderedDict, use global ordering in digester

[0.3.6a2] - 2021-02-24

• Add tests for Tag/ExtractionTag (coverage 87%)

[0.3.6a1] - 2021-02-24

• Fox group_key typing annotation in Field objects

[0.3.5] - 2021-02-23

• Store pdf in the snapshot

[0.3.4] - 2021-02-22

• Add group_key optional argument to Field objects

[0.3.3] - 2021-02-16

• All tests pass (84% coverage)
• Snapshot creator with threading
• Use mongomock for DB tests

[0.3.2] - 2021-02-09

• Update tests for storage

[0.3.1a4] - 2021-02-03

• Add threading to SnaphotBuilder

[0.3.1a3] - 2021-02-02

• Fix test_digestor.py to work with the correct document bson file
• All tests pass (82% coverage)

[0.3.1a2] - 2021-02-02

• Set DB.find call arguments no_cursor_timeout=True, batch_size=10 in SnapshotBuilder in order to avoid CursorNotFound timeout errors

[0.3.1a1] - 2021-01-29

• Add lines, search_text, extract_area_words methods to Page
• Add unittests for lines, search_text and extract_area_words methods
• Add infer_rows_from_words, clean_ocr_data, find_first_word_coords, intersects, compute_intersection_area methods in utils.py

[0.3.1a0] - 2021-01-28

• Add unittest for Document.from_dict
• Optimize digester output_fields lookup
• Add stick_coords option to Page.get_ocr_formatted
• Add opencv requirement

[0.3.0b20] - 2021-01-16

• Assign document in execute_genie when calling model.predict

[0.3.0b19] - 2021-01-12

• Assigning recipe output fields in digester for better performance

[0.3.0b18] - 2021-01-06

• Update digester to set id-s of the original fields from the blueprint
• Change document.tag imports to relative

[0.3.0b17] - 2021-01-03

• Model.predict in Model.execute_genie uses positional arguments

[0.3.0b16] - 2021-01-03

• Load LazyDocumentDicts as bson
• Make sure page numbers are integers

[0.3.0b15] - 2021-01-03

• Fix SnapshotBuilder.save_doc_json_to_snapshot document_id key

[0.3.0b14] - 2021-01-03

• Update Document.to_dict document_id key in metadata

[0.3.0b13] - 2021-01-03

• Add field name and ID in Field.to_dict implementations

[0.3.0b12] - 2021-01-03

• Add pages argument to construct_from_raw

[0.3.0b11] - 2021-01-03

• Fix Document.from_dict typo (construct_from_raw method call)

[0.3.0b10] - 2021-01-03

• Define Field data_types in to_dict methods
• Add area to IqDataTypesEnum David A minute ago

[0.3.0b9] - 2021-01-03

• Move FieldMapping to field.__init__
• Fix circular import in fields
• Use super().to_dict() in Field objects

[0.3.0b8] - 2021-01-03

• Fix Document.from_dict page iteration
• Add field types to Field.to_dict methods
• TableField allows no tags when calling to_dict method

[0.3.0b7] - 2021-01-02

• Update Dockerfile entrypoint to pycognaize.app.rest
• Fix SnapshotBuilder.create_document_zip cls.DB assignment expression

[0.3.0b6] - 2021-01-02

• Update changelog, fix all versions to 0.3.0b6

[0.3.0b4] - 2021-01-02

• Update all tests (75% coverage)
• Merge branch 'master' into major_refactor
• Add Snapshot to pycognaize.__init__
• Use scandir in DocumentBuilder._populate_pages
• Update import statement for Mapping
• Fix SnapshotBuilder to work with new Snapshot class
• Remove FieldMapping from DocumentBuilder, use a separate module instead
• Snapshot uses lazy_dict for reading individual documents
• Use tempfile module in model.py
• Add doc_file (document.json) to SnapStorageEnum
• Add AreaField to field.__init__
• Add to_dict and from_dict methods to Document class
• Add test coverage in tox
• Merged in add_test_for_overwriting_snapshot_in_s3 (pull request #47)
• pull updates from major refactor and merge with current branch, remove test_service, add test_store_snapshot_with_same_name
• Merge branch 'major_refactor' into add_test_for_overwriting_snapshot_in_s3
• add unittests to test snapshot overwriting, change overwriting log message
• Allow 'from pycognaize import Model'
• Add doctests to text_field module
• Update sphynx conf.py
• Update build_docs.sh to also build pdf documentation file
• Update setup.sh logs
• Move all setup configurations from setup.py to setup.cfg
• build_docs.sh generated html and pdf documentations
• Add doc/source/generated/ to .*ignore files

[0.3.0b3] - 2020-12-28

• Add script for building sphinx docs
• Minor docstring changes to Tag hshift and vshift methods
• SnapshotBuilder.DB added only on function call, to speed up module imports
• Add a single doctest to TextField constructor
• Add simplejson to requirements
• Add Model.execute_genie method

[0.3.0b1] - 2020-12-27

• Major refactored version
• Document > DocumentBuilder (DocumentBuilder has no instance, only methods for creating Documents, which are now equivalent to DocumentDataclass objects)
• DocumentDataclass > Document
• SnapshotProcessor > SnapshotBuilder
• Changed folder structure (no services package)
• DataSnapshot > Snapshot, DataRecipe > Recipe
• Add tox configuration for py36, py37, py38, py39, pypy
• Add 'MANIFEST.in' (required for 'TOX' to run properly)
• Add 'setup.cfg' for 'pytest'
• './setup.sh' builds and pushes a version, only if no tests fail
• Update README.md
• All tests pass on py36, py37, py38, py39, pypy

[0.2]

[0.2.5a4] - 2020-12-18

• Add docker push command in build.sh

[0.2.5a3] - 2020-12-17

• Change rest service to threaded=False

[0.2.5a2] - 2020-12-15

• Checkpoint version

[0.2.5a1] - 2020-12-15

• Delete numpy from req-s

[0.2.5a0] - 2020-12-04

• Update _build_df method in TableTag

[0.2.4] - 2020-11-27

• Fix srcFieldId log in Document.get_fields_by_id to print field id instead of the whole field

[0.2.3] - 2020-11-27

• Fix src_field_id issue in digestor.py

[0.2.2.a7] - 2020-11-27

• All tests are fixed and running

[0.2.2.a6] - 2020-11-18

• Fix issue in get_ocr_formatted

[0.2.2.a5] - 2020-11-13

• Add setup.sh script
• Use cloudstorageio>=1.1.2 which supports uploading 5GB+ files to s3
• Do not store TableTag ocr (makes the pickle dumps way too big for documents with many tables)

[0.2.2.a4] - 2020-11-07

• Fix typing annotation for DocumentDataclass._pages
• Add property AreaField.value
• Change super().tags to self.tags

[0.2.2.a3] - 2020-11-01

• Do not store TableTag.df, build it on call
• Update Range unittest (remove unnecessary error raising test cases)

[0.2.2.a2] - 2020-11-01

• Add area, height, width to (Cell)Range objects
• Add support for comparing Tag and (Cell)Range objects in magic methods of Tag
• In create_document_zip, if the recipe retrieved from DB is empty, through a ConnectionError Add get_table_cell_overlap to DocumentDataclass

[0.2.2.a1] - 2020-10-31

• Initiate database_setup on function call instead of import statement

[0.2.2.a0] - 2020-10-14

• Adjust problematic OCR in Page.get_ocr_formatted (if left >= right, right = left + 1, same for top/bottom)

[0.2.1.a3] - 2020-10-28

-Optionally build df for TableTag using ocr data

[0.2.1.a2] - 2020-10-22

• Add _build_df method in TableTag

[0.2.1.a1] - 2020-10-08

• Catch validation errors for TableTag

[0.2.1.a0] - 2020-09-23

• Adjust coordinates smaller than 0 and bigger than 100

[0.2.0.a12] - 2020-09-14

• Always remove snapshot zip before creating a new one

[0.2.0.a11] - 2020-09-06

• Update digester template check

[0.2.0.a10] - 2020-08-20

• Use proper relative_path in populate_pages
• Add to_dict in AreaField

[0.2.0.a9] - 2020-08-20

• Include data_recipe in DataSnapshot

[0.2.0.a8] - 2020-08-20

• Add value argument in construct_from_raw method in DateField

[0.2.0.a7] - 2020-07-30

• Filter fields with repeat_parent instead of source field id

[0.2.0.a6] - 2020-07-28

• SnapshotProcessor raises error in create_document_zip if document not found in the DB

[0.2.0.a5] - 2020-07-28

• Attribute value of TextField and DateField are strings

[0.2.0.a4] - 2020-07-27

• Add to_dict method to DateField

[0.2.0.a3] - 2020-07-24

• Fix construct_from_raw in ExtractionTag
• Implement to_dict for numeric_field

[0.2.0.a2] - 2020-07-24

• Add generated ObjectId-s in to_dict methods, update readme

[0.2.0.a1] - 2020-07-23

• Add additional include-services argument to setup.py

[0.2.0.a0] - 2020-07-23

• Add make_document_snap endpoint
• Implement DbStorage
• database_setup raises an error if failed
• Rename rest.app to service.rest
• Implement to_dict method for TableField TableTag and cell Range objects
• Add template_ids property in DataRecipe
• Add IqTableDividerEnum and update fields of other enums, including IqTableTagEnum
• Change cloudstorageio to version 1.0.10 in requirements
• Add digest_results function
• Add Storage abstract class
• Add to_dict methods in ExtractionTag and TextField
• Add IqFieldKeyEnum and add to_dict abstractmethods in Tag and Field abstract classes
• Update readme to use nosetests command
• Add abstract method decorators to methods in Tag, Field and Model abstract classes
• Make package exclusion dynamic in setup.py

[0.1]

[0.1.9.alpha1] - 2020-07-16

• Fix get_ocr_formatted in Page class
• Model object's predict method takes document_dataclass as input
• Major cosmetic change, full PEP8 compliance, except max line length
• Remove spreading_document, build and tag_utils modules

[0.1.9.alpha] - 2020-07-15

• Add Model abstract class
• Update README.md packaging instructions and setup.py
• Update tests, comment DocumentDataclass tests, until proper setUp/tearDown is implemented
• Update SnapshotProcessor import in the rest.app
• Remove unnecessary methods from Document, remove outdated tests
• Add AreaField
• Adjustments after renaming an IqTableEnum to IqCollectionEnum
• TableTag optionally uses raw cell data to construct cell ranges, change keys to 1-based index
• Change repr and str methods in TableField
• Add IqCellKeyEnum and IqTableFieldEnum

[0.1.8.alpha] - 2020-07-15

• Update make_snap endpoint to work with SnapshotProcessor, add fetch_document_zip endpoint
• Add SnapshotProcessor
• Add instruction for pushing to fury and pip install
• Minor cosmetic changes in ocr.py
• Remove source_id from Document object constructor
• Make tag parameter optional in TableField
• Remove raw parameter from DataSnapshot constructor
• Add collections to IqDatasetKeyEnum
• Remove CellTag

[0.1.7.alpha] - 2020-07-14

• repr for Range includes the value
• Add methods for constructing tags and fields from raw dictionaries
• Add OCRData and modify build_cell function using dividers
• Implement build ranges
• Cell ranges added
• Remove an outdated comment from DocumentDataclas
• Add TableDivider object
• Add test for DocumentDataclass
• Modify constructors for Field and Tag objects
• Add IqTagKeyEnum to enums
• Document.get_y returns a list of fields instead of a single field
• Add get_ocr_formatted method in Page
• add src_field_id to IqDocumentKeysEnum
• Move database_setup into a separate module

[0.1.6.alpha] - 2020-07-03

• Store relative path in page objects, remove SNAP_STORAGE_PATH constant and use env variable everywhere, fix some typos in TODOs
• Add document_src, document_id and pages as properties in DocumentDataClass
• Improve DataSnapshot api, add document_dataclasses and get methods
• Images and ocr folders are document ids instead of document src
• Pickled snapshot is saved as snap.pickle instead of snap..pickle
• Add StoredSnapshotException
• Add src attribute in document, put NoneField in a separate module
• Fix Page repr

[0.1.4.alpha] - 2020-07-02

• Improve log format
• Redefine Snapshot, return traceback if rest.app fails
• Store images and ocr with snapshot
• Change pymongo to pymongo[srv] in requirements, fix DB name splitting in iq.__init__
• Remove db dependency from documents
• Rename Snapshot to DataSnapshot, Pipeline to DataPipeline, Recipe to DataRecipe
• Add test for DocumentDataclass
• add load_bson_by_path in utils
• Add document and recipe bsons to test resources

[0.1.2.alpha] - 2020-06-10

• Use rest endpoint for get_data in DataSnap
• Change defaults for SNAP_STORAGE_PATH and DEFAULT_DB_URL, add back DEFAULT_DATASNAP_ENDPOINT
• Fix TypeError message in DataPipe.update
• Add IQ_SNAP_STORAGE_PATH back to EnvConfigEnum
• Add pydrive to requirements in order to solve issue with cloudstorageio, should be changed once cloudstorageio is updated

[0.1.3.alpha] - 2020-06-26

• Add DocumentDataclass
• Add get_x, get_y methods to Document
• Rename DataRecipe to Recipe, add input_fields, output_fields attributes to Recipe
• Rename snap to snapshot
• Add raw_field_type in IqRecipeEnum
• Cosmetic changes in DateField
• Add NoneField

[0.1.1] - 2020-06-08

• Modify rest.app to make snapshots through a shared volume
• Implement DataSnap.create and DataSnap initialization through a shared volume
• Modify DataPipe in order to be inherited by DataSnap
• Add cloudstorageio to requirements
• Add SnapshotPathMissingException and SnapshotExistsException
• Remove IQ_DATASNAP_URL and add IQ_SNAP_STORAGE_PATH to EnvConfigEnum
• Remove igraph dependencies from Dockerfile
• Add DATASET_TYPE to DataSnap

[0.1.0] - 2020-05-28

• Allow to import dataset types from pycognaize.datasets
• Add DataSnap
• Refactor the package structure

[0.0]

[0.0.9] - 2020-05-26

• Add Dockerfile and build.sh for building docker image with hash

[0.0.8] - 2020-05-24

• Fix DEFAULT_DB error handling, add rest API for snap

[0.0.7] - 2020-05-23

• Add raw and construct_from_raw methods
• Add data snap serialization and deserialization

[0.0.6] - 2020-05-22

• Fix parse_periods in SpreadingDocument

[0.0.5] - 2020-05-22

• Change df property to return CellTag objects

[0.0.4] - 2020-05-22

• Add get_document_periods method
• Add df property to TableTag
• Inherit SpreadingDocument class from Document

[0.0.3] - 2020-05-17

• Change __repr__ in Field object, add TODO for document name column in DataRecipe
• Define a DEFAULT_DB object, with a single env variable - IQ_DB_URL

[0.0.2] - 2020-05-15

• Created DataRecipe

[0.0.1]

• Created Tag, Field, Page and Document abstractions for pycognaize