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Python library for scientific analysis of microscopy data

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pycroscopy is a python package for image processing and scientific analysis of imaging modalities such as multi-frequency scanning probe microscopy, scanning tunneling spectroscopy, x-ray diffraction microscopy, and transmission electron microscopy. pycroscopy uses a data-centric model wherein the raw data collected from the microscope, results from analysis and processing routines are all written to standardized hierarchical data format (HDF5) files for traceability, reproducibility, and provenance.

Please visit our homepage for more information and installation instructions.

If you use pycroscopy for research, we would appreciate if you could cite our Arxiv paper titled “USID and Pycroscopy - Open frameworks for storing and analyzing spectroscopic and imaging data”

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