pycuda-plus 0.3.0

User-friendly library to enhance PyCUDA functionality

PyCUDA Plus

PyCUDA Plus is an enhanced Python library built on top of PyCUDA, designed to simplify GPU programming and execution. It provides high-level abstractions and utilities for working with CUDA kernels, memory management, and context handling, allowing developers to focus on writing efficient CUDA code without dealing with low-level details.

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Key Features

• Kernel Management: Compile, load, and execute custom CUDA kernels easily with the KernelExecutor.
• Memory Management: Simplified allocation and transfer of device and host memory using the MemoryManager.
• Context Handling: Seamless setup and teardown of CUDA contexts with the CudaContextManager.
• Error Checking: Built-in error detection and reporting via CudaErrorChecker.
• Utility Functions: Prebuilt kernels, NumPy support, and grid/block configuration helpers for common operations.
• Grid/Block Configuration: Automate grid and block size calculations for CUDA kernels using GridBlockConfig.
• Performance Profiling: Measure execution time of CUDA kernels with PerformanceProfiler.

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Prerequisites: NVIDIA CUDA Toolkit Installation

To use PyCUDA Plus, ensure the NVIDIA CUDA Toolkit is installed on your system. Follow these steps:

1. Verify Your NVIDIA GPU Compatibility
   Check your GPU model's compatibility with CUDA here.

2. Download the CUDA Toolkit
   Visit the CUDA Toolkit download page and download the version compatible with your GPU and operating system.

3. Install the Toolkit

   • Follow the installation guide for your platform:
     • Linux: Linux Installation Guide
     • Windows: Windows Installation Guide

4. Set Environment Variables
   After installation, ensure the CUDA Toolkit is added to your environment variables:

   • On Linux:

     export PATH="/usr/local/cuda/bin:$PATH"
     export LD_LIBRARY_PATH="/usr/local/cuda/lib64:$LD_LIBRARY_PATH"
     

     Add these lines to your shell configuration file (~/.bashrc, ~/.zshrc, etc.) for persistent access.
   • On Windows: Add the following paths to your Environment Variables:
     • C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\<Your_Version>\bin
     • C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\<Your_Version>\libnvvp

5. Verify Installation
   After installation, verify the CUDA Toolkit is working correctly:

   nvcc --version
   

Prerequisites: g++ Installation for CUDA 12.x

To compile CUDA programs and ensure compatibility with PyCUDA Plus, you need to install g++ 11 or later. The following instructions guide you through installing and setting up g++ 11 on your system.

Steps to Install g++ 11 or Later on Linux

1. Add the Toolchain Repository

Add the required repository to access newer versions of g++:

sudo add-apt-repository ppa:ubuntu-toolchain-r/test
sudo apt-get update

2. Install g++ 11

Install the g++ version that is compatible with CUDA 12.x or later:

sudo apt-get install g++-11 gcc-11

3. Update the Default gcc and g++ Versions

Use update-alternatives to switch between different versions of g++:

sudo update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-9 10
sudo update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-11 20
sudo update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-9 10
sudo update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-11 20

4. Select the Default g++ Version

Select g++-11 as the default version:

sudo update-alternatives --config gcc
sudo update-alternatives --config g++

Follow the prompts to choose gcc-11 and g++-11.

5. Verify the Installation

Once you've selected the default version, verify the installation by checking the g++ version:

g++ --version

It should show g++ version 11 or later.

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Troubleshooting

If you run into issues or the version doesn't update correctly, ensure that your system is correctly pointing to the newly installed g++ version by running:

which g++

This should return the path to g++-11.

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Installation

To install the pycuda_plus library, run:

pip install pycuda_plus

Ensure you have the following prerequisites installed:

• CUDA Toolkit
• PyCUDA
• Compatible NVIDIA GPU drivers

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Getting Started

Example 1: Vector Addition using prebuilt kernel

import numpy as np
from pycuda_plus.core.kernel import KernelExecutor
from pycuda_plus.core.memory import MemoryManager
from pycuda_plus.core.error import CudaErrorChecker
from pycuda_plus.core.context import CudaContextManager
from pycuda_plus.utils.prebuilt_kernels import get_prebuilt_kernels 

def vector_addition_example(N):
    kernel = KernelExecutor()
    memory_manager = MemoryManager()  # Using the MemoryManager
    context_manager = CudaContextManager()
    context_manager.initialize_context()

    try:
        # Retrieve the vector_add kernel code from prebuilt kernels
        prebuilt_kernels = get_prebuilt_kernels()
        kernel_code = prebuilt_kernels['vector_add']
        
        # Compile the vector_add kernel
        kernel.compile_kernel(kernel_code, 'vector_add')

        A = np.random.rand(N).astype(np.float32)
        B = np.random.rand(N).astype(np.float32)
        C = np.zeros(N, dtype=np.float32)

        vector_add = kernel.get_kernel('vector_add')

        # Allocate memory on the GPU
        d_A = memory_manager.allocate_device_array(A.shape, dtype=np.float32)
        d_B = memory_manager.allocate_device_array(B.shape, dtype=np.float32)
        d_C = memory_manager.allocate_device_array(C.shape, dtype=np.float32)

        # Copy data from host to GPU
        memory_manager.copy_to_device(A, d_A)
        memory_manager.copy_to_device(B, d_B)

        block_size = 256
        grid_size = (N + block_size - 1) // block_size

        # Launch the kernel
        kernel.launch_kernel(vector_add, (grid_size, 1, 1), (block_size, 1, 1), d_A, d_B, d_C, np.int32(N))

        error_checker = CudaErrorChecker()
        error_checker.check_errors()

        # Copy the result back to host
        memory_manager.copy_to_host(d_C, C)
        return C
    finally:
        context_manager.finalize_context()

if __name__ == "__main__":
    N = 1000000  # Size of the vectors
    result = vector_addition_example(N)
    if result is not None:
        print(f"Vector addition result (first 5 elements):\n{result[:5]}")
    else:
        print("Error in vector addition.")

Example 2: Matrix Multiplication using custom kernel

import numpy as np
from pycuda_plus.core.kernel import KernelExecutor
from pycuda_plus.core.memory import MemoryManager
from pycuda_plus.core.context import CudaContextManager
from pycuda_plus.core.error import CudaErrorChecker

matrix_multiply_kernel = """
__global__ void matrix_multiply(float *A, float *B, float *C, int N) {
    int row = blockIdx.y * blockDim.y + threadIdx.y;
    int col = blockIdx.x * blockDim.x + threadIdx.x;
    if (row < N && col < N) {
        float value = 0;
        for (int k = 0; k < N; ++k) {
            value += A[row * N + k] * B[k * N + col];
        }
        C[row * N + col] = value;
    }
}
"""

def matrix_multiply_example(N):
    kernel = KernelExecutor()
    memory_manager = MemoryManager()
    context_manager = CudaContextManager()
    context_manager.initialize_context()

    try:
        # Host arrays
        A = np.random.rand(N, N).astype(np.float32)
        B = np.random.rand(N, N).astype(np.float32)
        C = np.zeros((N, N), dtype=np.float32)

        # Compile the kernel
        compiled_kernel = kernel.compile_kernel(matrix_multiply_kernel, 'matrix_multiply')

        # Allocate memory on the device
        d_A = memory_manager.allocate_device_array(A.shape, dtype=np.float32)
        d_B = memory_manager.allocate_device_array(B.shape, dtype=np.float32)
        d_C = memory_manager.allocate_device_array(C.shape, dtype=np.float32)

        # Copy data to device
        memory_manager.copy_to_device(A, d_A)
        memory_manager.copy_to_device(B, d_B)

        # Configure grid and block sizes
        block_size = 16
        grid_size = (N + block_size - 1) // block_size

        # Launch the kernel
        kernel.launch_kernel(
            compiled_kernel,
            (grid_size, grid_size, 1),
            (block_size, block_size, 1),
            d_A, d_B, d_C, np.int32(N)
        )

        # Error checking
        error_checker = CudaErrorChecker()
        error_checker.check_errors()

        # Copy the result back to the host
        memory_manager.copy_to_host(d_C, C)
        return C

    finally:
        # Finalize the context
        context_manager.finalize_context()

if __name__ == "__main__":
    N = 512
    result = matrix_multiply_example(N)
    print(f"Matrix multiplication result (first 5x5 elements):\n{result[:5, :5]}")

Example 3: Matrix Addition with Profiling using custom kernel

import numpy as np
from pycuda_plus.core.kernel import KernelExecutor
from pycuda_plus.core.memory import MemoryManager
from pycuda_plus.core.grid_block import GridBlockConfig
from pycuda_plus.core.profiler import PerformanceProfiler
from pycuda_plus.core.context import CudaContextManager

matrix_addition_kernel = """
__global__ void matrix_add(float *A, float *B, float *C, int rows, int cols) {
    int row = blockIdx.y * blockDim.y + threadIdx.y;
    int col = blockIdx.x * blockDim.x + threadIdx.x;

    if (row < rows && col < cols) {
        int idx = row * cols + col;
        C[idx] = A[idx] + B[idx];
    }
}
"""

def matrix_addition_with_profiling(rows, cols):
    kernel_executor = KernelExecutor()
    memory_manager = MemoryManager()
    grid_config = GridBlockConfig(threads_per_block=256)
    profiler = PerformanceProfiler()
    context_manager = CudaContextManager()

    context_manager.initialize_context()

    try:
        A = np.random.rand(rows, cols).astype(np.float32)
        B = np.random.rand(rows, cols).astype(np.float32)
        C = np.zeros((rows, cols), dtype=np.float32)

        d_A = memory_manager.allocate_device_array(A.shape, dtype=np.float32)
        d_B = memory_manager.allocate_device_array(B.shape, dtype=np.float32)
        d_C = memory_manager.allocate_device_array(C.shape, dtype=np.float32)
        memory_manager.copy_to_device(A, d_A)
        memory_manager.copy_to_device(B, d_B)

        compiled_kernel = kernel_executor.compile_kernel(matrix_addition_kernel, 'matrix_add')

        total_elements = rows * cols
        grid, block = grid_config.auto_config(total_elements)

        grid = (grid[0], grid[0], 1)
        block = (block[0], 1, 1)

        execution_time = profiler.profile_kernel(
            compiled_kernel, grid, block, d_A, d_B, d_C, np.int32(rows), np.int32(cols)
        )
        print(f"Matrix addition kernel execution time: {execution_time:.6f} seconds")

        memory_manager.copy_to_host(d_C, C)

        return C

    finally:
        context_manager.finalize_context()

if __name__ == "__main__":
    rows, cols = 1024, 1024
    result = matrix_addition_with_profiling(rows, cols)
    print(f"Matrix addition result (first 5x5 elements):\n{result[:5, :5]}")

Example 4: Numpy Helper

import numpy as np
from pycuda_plus.core.memory import MemoryManager
from pycuda_plus.utils.numpy_support import NumpyHelper
from pycuda_plus.core.context import CudaContextManager

def example_using_numpy_helper(N):
    # Instantiate required components
    memory_manager = MemoryManager()
    numpy_helper = NumpyHelper()  # We'll keep this in case we need other helper functions
    context_manager = CudaContextManager()

    # Initialize the CUDA context
    context_manager.initialize_context()

    try:
        # Create an array on the host
        host_array1 = np.random.rand(N).astype(np.float32)
        host_array2 = np.random.rand(N).astype(np.float32)

        # Generate a patterned array using NumpyHelper (e.g., a range array)
        d_patterned_array = numpy_helper.generate_patterned_array((N,), 'range')
        patterned_array = numpy_helper.batch_copy_to_host([d_patterned_array])[0]

        # Batch copy arrays to device memory using NumpyHelper
        d_array1, d_array2 = numpy_helper.batch_copy_to_device([host_array1, host_array2])

        # Print some results
        print("Patterned array (first 10 elements):", patterned_array[:10])
        print("Host Array 1 (first 10 elements):", host_array1[:10])
        print("Host Array 2 (first 10 elements):", host_array2[:10])

        # Return the arrays for further use if needed
        return {
            "patterned_array": patterned_array[:10],
            "host_array1": host_array1[:10],
            "host_array2": host_array2[:10],
        }

    finally:
        # Finalize CUDA context
        context_manager.finalize_context()

if __name__ == "__main__":
    N = 10000  # Array size
    results = example_using_numpy_helper(N)

    # Print results
    print("Patterned array (first 10 elements):", results["patterned_array"])
    print("Host Array 1 (first 10 elements):", results["host_array1"])
    print("Host Array 2 (first 10 elements):", results["host_array2"])

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API Documentation

Core Modules

1. KernelExecutor

   • Compile and launch CUDA kernels.
   • Example:

     kernel_executor = KernelExecutor()
     compiled_kernel = kernel_executor.compile_kernel(kernel_code, kernel_name)
     kernel_executor.launch_kernel(compiled_kernel, grid, block, *args)
     

2. MemoryManager

   • Allocate, manage, and transfer memory between host and device.
   • Example:

     memory_manager = MemoryManager()
     device_array = memory_manager.allocate_device_array(shape, dtype)
     memory_manager.copy_to_device(host_array, device_array)
     memory_manager.copy_to_host(device_array, host_array)
     

3. CudaContextManager

   • Simplify CUDA context setup and teardown.
   • Example:

     context_manager = CudaContextManager()
     context_manager.initialize_context()
     context_manager.finalize_context()
     

4. CudaErrorChecker

   • Check for CUDA errors during kernel execution.
   • Example:

     error_checker = CudaErrorChecker()
     error_checker.check_errors()
     

5. GridBlockConfig

   • Automate grid and block size calculation.
   • Example:

     grid_config = GridBlockConfig(threads_per_block=256)
     grid, block = grid_config.auto_config(shape)
     print(f"Grid: {grid}, Block: {block}")
     

6. PerformanceProfiler

   • Measure execution time of CUDA kernels.
   • Example:

     profiler = PerformanceProfiler()
     execution_time = profiler.profile_kernel(kernel, grid, block, *args)
     print(f"Kernel execution time: {execution_time:.6f} seconds")
     

7. NumpyHelper

• Purpose: Provide advanced utilities for integrating NumPy arrays with CUDA device memory using pycuda_plus.
• Functions:
  • reshape_device_array(device_array, new_shape): Reshape a device array into a new shape without changing its contents.
  • generate_patterned_array(shape, pattern): Generate patterned device arrays (e.g., range, linspace) for device-side operations.
  • batch_copy_to_device(numpy_arrays): Batch copy multiple NumPy arrays to device memory.
  • batch_copy_to_host(device_arrays): Batch copy multiple device arrays to host memory.
• Example:

  numpy_helper = NumpyHelper()
  d_patterned_array = numpy_helper.generate_patterned_array((1000,), 'range')
  d_array1, d_array2 = numpy_helper.batch_copy_to_device([array1, array2])
  result = numpy_helper.batch_copy_to_host([d_result])[0]
  

Utility Modules

• numpy_support: Convert between NumPy arrays and GPU memory.
• prebuilt_kernels: Access commonly used CUDA kernels. vector_add: Element-wise vector addition vector_scale: Scalar multiplication of vectors matrix_multiply: Basic matrix multiplication element_wise_sigmoid: Sigmoid function application array_reduction_sum: Parallel sum reduction parallel_max: Parallel maximum value finding normalize_vector: Vector normalization
• grid_block: Helpers for calculating grid and block dimensions.
• profiler: Tools for profiling CUDA kernel execution.

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Contributing

Contributions are welcome! Please open issues or submit pull requests on the GitHub repository.

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License

PyCUDA Plus is licensed under the MIT License. See the LICENSE file for details.

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Acknowledgments

Built on the foundation of PyCUDA, with additional utilities for enhanced usability and performance.