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Seamlessly integrate numpy arrays into pydantic models

Reason this release was yanked:

Pydantic v1 enforced

Project description

pydantic-numpy

Integrate NumPy into Pydantic, and provide tooling! NumpyModel make it possible to dump and load np.ndarray within model fields!

Install

pip install pydantic-numpy

Usage

For more examples see test_ndarray.py

import pydantic_numpy.dtype as pnd
from pydantic_numpy import NDArray, NDArrayFp32, NumpyModel


class MyPydanticNumpyModel(NumpyModel):
    K: NDArray[float, pnd.float32]
    C: NDArrayFp32  # <- Shorthand for same type as K


# Instantiate from array
cfg = MyPydanticNumpyModel(K=[1, 2])
# Instantiate from numpy file
cfg = MyPydanticNumpyModel(K={"path": "path_to/array.npy"})
# Instantiate from npz file with key
cfg = MyPydanticNumpyModel(K={"path": "path_to/array.npz", "key": "K"})

cfg.K
# np.ndarray[np.float32]

cfg.dump("path_to_dump_dir", "object_id")
cfg.load("path_to_dump_dir", "object_id")

NumpyModel.load requires the original mode, use model_agnostic_load when you have several models that may be the right model.

Data type (dtype) support!

This package also comes with pydantic_numpy.dtype, which adds subtyping support such as NDArray[float, pnd.float32]. All subfields must be from this package as numpy dtypes have no Pydantic support, which is implemented in this package through the generic class workflow.

Considerations

The NDArray class from pydantic-numpy is daughter of np.ndarray. IDEs and linters might complain that you are passing an incorrect type to a model. The only solution is to merge these change into numpy.

You can also use the typings in pydantic.validate_arguments.

You can install from cheind's repository if you want Python 3.8 support.

History

The original idea originates from this discussion, and forked from cheind's repository.

Project details


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