Query EcoTaxa and process its output
Project description
pyecotaxa
Python package to query EcoTaxa and process its output.
pyecotaxa.archive: Read and write EcoTaxa archives
from pyecotaxa.archive import read_tsv, write_tsv
# Read a .tsv file into a pandas DataFrame
# In contrast to pd.read_csv, this function transparently handles the type header
df = read_tsv(path_to_file)
# Write pandas DataFrame into a .tsv file
# In contrast to df.to_csv, this function can generate the type header
write_tsv(df, path_to_file)
pyecotaxa.remote: Interact with a remote EcoTaxa server
from pyecotaxa.remote import Remote
r = Remote()
# Login
r.login(username, password)
# Pull one or more project archives by project_id
r.pull(project_ids)
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