pyeunomia 0.1.1

A standard dataset in the OMOP (Observational Medical Outcomes Partnership) Common Data Model (CDM) for testing and demonstration purposes

pyeunomia

Eunomia is a standard dataset in the OMOP (Observational Medical Outcomes Partnership) Common Data Model (CDM) for testing and demonstration purposes. Eunomia is used for many of the exercises in the Book of OHDSI.

This library is just a simple wrapper for a Duckdb database created from the CSV export available in the exportToCsv function.

Usage

The connect() method returns a SQL interface compliant with the DB-API 2.0 specification described by PEP 249.

import pyeunomia
conn = pyeunomia.Eunomia().connect()
cur = conn.execute("select count(*) from person")
cur.fetchone()

(2694,)

conn.close()