Skip to main content
Join the official 2019 Python Developers SurveyStart the survey!

filters FASTQ files

Project description

pyfastq_filter

Filter FASTQ Files.

Installation

pip3 install --user pyfastq_filter

Usage

Extract only FASTQ entries with sequence length > 5000:

pyfastq_filter.py -l 5000 example.fastq > example-l5000.fastq

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for pyfastq-filter, version 0.2.0
Filename, size File type Python version Upload date Hashes
Filename, size pyfastq_filter-0.2.0.tar.gz (1.7 kB) File type Source Python version None Upload date Hashes View hashes

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN SignalFx SignalFx Supporter DigiCert DigiCert EV certificate StatusPage StatusPage Status page