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ODE modeling in Python

Project description

pypi version Build status

Development of a generic framework for ode models, more specifically, aiming to solve compartmental type problems.

This package depends on:

dask
matplotlib
enum34
pandas
python-dateutil
python-libsbml
numpy
scipy
sympy

and they should be installed if not already available. Installation can be performed via:

$ python setup.py install

and tested via:

$ python setup.py test

If the test fails, then the documentation for the package will not compile. A more in depth documentation can be found in the folder:

$ doc

Note that building the documentation can be extremely slow depending on the setup of the system. Further details can be found at it’s own read me:

$ doc/README.rst

Please be aware that there may be redundant files within the package as it is under active development.

Contributors

Edwin Tye (Edwin.Tye@phe.gov.uk)

Version

0.1.1 Improved parallel computation

Project details


Release history Release notifications

This version
History Node

0.1.1

History Node

0.1.0

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