Python package for reading, writing, visualizing, and comparing IWFM models
Project description
pyiwfm
Python package for reading, writing, visualizing, and comparing IWFM (Integrated Water Flow Model) models.
Installation
# Basic installation (includes matplotlib, geopandas, shapely, h5py)
pip install pyiwfm
# With mesh generation (triangle, gmsh)
pip install "pyiwfm[mesh]"
# With VTK 3D export
pip install "pyiwfm[viz]"
# With web viewer (FastAPI + React + vtk.js + deck.gl)
pip install "pyiwfm[webapi]"
# With PEST++ integration (scipy)
pip install "pyiwfm[pest]"
# With all optional dependencies
pip install "pyiwfm[all]"
# Development (editable install with dev tools)
pip install -e ".[dev]"
Budget Post-Processing
Export IWFM budget and zone budget results to Excel workbooks:
# Export budgets from a control file (one .xlsx per budget spec)
pyiwfm budget C2VSimFG_Budget_xlsx.in
# Export zone budgets from a control file
pyiwfm zbudget C2VSimFG_ZBudget_xlsx.in
Or use the Python API directly:
from pyiwfm.io import BudgetReader, budget_to_excel
reader = BudgetReader("GW_Budget.hdf")
budget_to_excel(
reader, "GW_Budget.xlsx",
volume_factor=2.29568e-05, volume_unit="AC.FT.",
)
Quick Start
from pyiwfm import AppGrid, Node, Element, Stratigraphy
import numpy as np
# Create a simple mesh
nodes = {
1: Node(id=1, x=0.0, y=0.0),
2: Node(id=2, x=100.0, y=0.0),
3: Node(id=3, x=100.0, y=100.0),
4: Node(id=4, x=0.0, y=100.0),
}
elements = {
1: Element(id=1, vertices=(1, 2, 3, 4), subregion=1),
}
grid = AppGrid(nodes=nodes, elements=elements)
grid.compute_areas()
grid.compute_connectivity()
print(f"Grid: {grid.n_nodes} nodes, {grid.n_elements} elements")
Model I/O Example
from pathlib import Path
from pyiwfm.io import load_complete_model, save_complete_model
# Load a complete IWFM model from simulation main file
model = load_complete_model("Simulation/Simulation.in")
print(f"Loaded model with {model.grid.n_nodes} nodes")
print(f"Groundwater wells: {len(model.groundwater.wells) if model.groundwater else 0}")
# Save model to new directory
save_complete_model(model, Path("output_model"))
# Write time series to HEC-DSS (requires bundled C library or HECDSS_LIB env var)
from pyiwfm.io.dss import DSSTimeSeriesWriter, DSSPathnameTemplate, HAS_DSS_LIBRARY
if HAS_DSS_LIBRARY:
template = DSSPathnameTemplate(a_part="IWFM", c_part="HEAD", e_part="1DAY")
with DSSTimeSeriesWriter("output.dss") as writer:
writer.write_timeseries(head_timeseries, template.make_pathname(location="WELL_1"))
Web Visualization
pyiwfm includes an interactive web viewer built with FastAPI (backend) and React + vtk.js + deck.gl (frontend). Launch it with:
# CRS is optional — defaults to C2VSimFG UTM Zone 10N for most models
pyiwfm viewer --model-dir /path/to/model
# Specify CRS explicitly if needed
pyiwfm viewer --model-dir /path/to/model --crs "+proj=utm +zone=10 +datum=NAD83 +units=us-ft +no_defs"
The viewer provides four tabs:
- Overview: Model summary and metadata
- 3D Mesh: Interactive vtk.js 3D rendering with layer visibility, cross-section slicing, stream network overlay, and z-exaggeration
- Results Map: deck.gl + MapLibre map showing head contours, drawdown with pagination/animation support, hydrograph locations, head statistics, and observation upload/comparison
- Budgets: Plotly charts of water budget time series with location/column selection
Additional API endpoints:
- Data Export: CSV (heads, budgets, hydrographs), GeoJSON mesh, GeoPackage (multi-layer), and publication-quality matplotlib plots (PNG/SVG)
- Model Comparison: Load a second model and compare meshes/stratigraphy via the
ModelDifferengine - Head Statistics: Time-aggregated min/max/mean/std per node across all timesteps
The frontend is pre-built into src/pyiwfm/visualization/webapi/static/. To rebuild from source:
cd frontend && npm install && npm run build
Features
- Core Data Structures: Node, Element, Face, AppGrid, Stratigraphy, TimeSeries
- BaseComponent ABC: Common interface (
validate(),n_items) for all model components (groundwater, streams, lakes, root zone, small watersheds, unsaturated zone) - Complete Model I/O: Full roundtrip support for reading and writing IWFM models
- ASCII files (nodes, elements, stratigraphy, time series)
- Binary files (Fortran unformatted)
- HDF5 files (efficient large model storage)
- HEC-DSS 7 files (time series with optional library support)
- Budget Post-Processing: Parse IWFM budget/zbudget control files and export to Excel
- One sheet per location/zone with title lines, bold headers, and auto-fitted columns
- Unit conversion factors (FACTLTOU, FACTAROU, FACTVLOU) applied per column type
- CLI commands:
pyiwfm budgetandpyiwfm zbudget
- Component Writers: Write complete IWFM input files with shared
BaseComponentWriterConfig- Groundwater: wells, pumping, boundary conditions, aquifer parameters
- Streams: nodes, reaches, diversions, bypasses, rating curves
- Lakes: definitions, elements, rating curves, outflows
- Root Zone: crop types, soil parameters, land use
- Small Watersheds: watershed units, root zone/aquifer parameters
- Unsaturated Zone: element layers, soil moisture
- Simulation: main control file
- PreProcessor Integration: Load/save complete models from IWFM file structure
- Model Factory: Extracted construction helpers (reach building, coordinate resolution, parametric grids, binary loading) into
pyiwfm.core.model_factory - Mesh Generation: Triangle and Gmsh wrappers
- Visualization: GIS export (GeoPackage download), VTK 3D export, matplotlib plot generation (PNG/SVG), interactive web viewer with budget charts, head maps, hydrograph comparison, drawdown animation, and head statistics
- Model Comparison: Diff and comparison metrics, including web viewer comparison endpoint
License
GPL-2.0 - Same as IWFM
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